Arvicanthis niloticus (African grass rat): 143438041
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Entry
143438041 CDS
T08817
Symbol
Lfng
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase lunatic fringe
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu00514
Other types of O-glycan biosynthesis
anu04330
Notch signaling pathway
anu05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
143438041 (Lfng)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
143438041 (Lfng)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
143438041 (Lfng)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
anu01003
]
143438041 (Lfng)
Enzymes [BR:
anu01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
143438041 (Lfng)
Glycosyltransferases [BR:
anu01003
]
Glycan extension
O-Glycan
143438041 (Lfng)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
DUF6895
Fur_reg_FbpA
Motif
Other DBs
NCBI-GeneID:
143438041
NCBI-ProteinID:
XP_076779637
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All DBs
Position
24:31381615..31389791
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AA seq
378 aa
AA seq
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MLQRCGRRLLLALVGALLACLLVLTADPPPTPVPAERGRRALRSLAGSSGAAPGPGSRAA
VDPGVLAREVHSLSEYFSLLTRARRDADPPPGVASRQGDGHPRPPAEVLSPRDVFIAVKT
TRKFHRARLDLLFETWISRHKEMTFIFTDGEDEALAKLTGNVVLTNCSAAHSRQALSCKM
AVEYDRFIESGKKWFCHVDDDNYVNLRALLRLLASYPHTQDVYIGKPSLDRPIQATERIS
EHKVRPVHFWFATGGAGFCISRGLALKMGPWASGGHFMSTAERIRLPDDCTIGYIVEALL
GVPLIRSGLFHSHLENLQQVPTTELHEQVTLSYGMFENKRNAVHIKGPFSVEADPSRFRS
VHCLLYPDTPWCPRTTVF
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgctccagcggtgcggccggcgcctgctgctggcgctggtgggcgcgctgctggcttgt
ctcttggtgctcacggccgacccgccgccgactccggtgcccgctgagcgcggacggcga
gctctgcgtagcctggcgggctcctctggggcggctccgggtccagggtccagagcggcc
gtggatcccggagtcctcgcccgcgaggtgcacagcctctccgagtacttcagtctactt
acccgcgcgcgcagagacgcggatccaccgcccggggtcgcttctcgccagggcgacggc
catccgcgtccccccgctgaggttctgtcccctcgcgacgtctttatcgccgtcaagacc
accagaaagtttcaccgcgcgcggctcgacctgctgttcgagacctggatctcgcgccac
aaggagatgacgttcatcttcacggacggggaggacgaagctctggccaagctcacaggc
aatgtggtactcaccaactgctctgcggctcacagccgccaggctctgtcctgcaagatg
gctgtggagtatgaccggttcattgagtcagggaagaagtggttctgtcacgtggatgac
gacaactatgtcaacctccgggcgctgttgcggctgctggccagctatccccacacccaa
gatgtgtacatcggcaagcccagcctggacaggcccatccaggccacggaacggatcagc
gagcacaaagtgagacctgtccacttctggtttgccaccggaggagctggcttctgcatc
agccgagggctggccctaaagatgggcccatgggccagcgggggacacttcatgagcacg
gcagagcgcatccggctccccgacgattgcaccattggctatattgtagaagcactgctg
ggtgtgcccctcatccggagcggcctcttccactcccacctggagaacctgcagcaagtg
cccaccaccgagctccatgagcaggtgaccctaagctatggcatgtttgaaaacaagagg
aacgcagtgcacatcaagggaccgttctcggtggaggctgacccatccaggttccgctct
gtccactgcctcctgtacccggacacaccctggtgtccccgcaccactgtcttctag
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