Amphiprion ocellaris (clown anemonefish): 111562580
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Entry
111562580 CDS
T06018
Symbol
c9orf72
Name
(RefSeq) guanine nucleotide exchange factor C9orf72 homolog isoform X1
KO
K23609
guanine nucleotide exchange protein C9orf72
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
111562580 (c9orf72)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aoce04131
]
111562580 (c9orf72)
Membrane trafficking [BR:
aoce04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
111562580 (c9orf72)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C9orf72-like
Motif
Other DBs
NCBI-GeneID:
111562580
NCBI-ProteinID:
XP_023116955
Ensembl:
ENSAOCG00000006800
LinkDB
All DBs
Position
20:complement(21340482..21355600)
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AA seq
462 aa
AA seq
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MSSGCPPQSPAVAKSEVAVEGQCPLLAATFAYWDNILGPRVRHIWAPKGDQLMFLSDGEV
TFLANHTLNGEILRSAECGAVDVKFFVLAEKGVIIVSLIFDGELKGDKNTCALSIILPQT
ELAFYLPLHTICVERLKHVIRKGRIWMQKGYNIISVLSLEIVPIMELLASMKTHCVPEDI
DIKDTVLNDDDIGDSCHEDFLHKAISSHLQTCGCSIVVGSNPEKINKIVRTLCLFLTPAE
RKCSRLCRADSSFKYDTGLFVQGLLKDSTGSFVLPFRQVLYSPYPTTHIDVDINTVKQMP
PCHEHTYNQRRYMRSELSALWKTDSEDDIPPDTIIHTDETFTPDLNIFQDVMHKDTLVKS
FIDEVFMLKPGLSLRSTYLAQFLLLLHRKALTLLKYIEDETQKGKKPFRSLRNLKNDLHL
TVEGDLNIIMAFAEKLRAGLHSFVFGKPFYTSMQERDVLMSF
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctggctgtccaccccagtcgcctgctgtggcaaagtctgaggtagcagtagag
ggacaatgcccgctgctggctgccaccttcgcctactgggacaacatcctgggtccacga
gtgcgccacatctgggcaccaaagggtgaccagctgatgttcctcagcgatggagaggtc
acatttctggctaatcatacactgaatggggagatcctgcgcagtgcagagtgtggcgcc
gtggatgtgaagttctttgtcctggcagaaaagggcgtcattattgtttccctcatcttc
gatggtgagctgaagggggacaagaacacatgtgccttgtccattattctccctcagaca
gagctggccttttacctgccgctgcataccatctgcgtggagaggctgaagcacgttatc
cgcaagggacgcatttggatgcagaagggctacaatatcatctcagtgctgagcttggag
attgtccctatcatggagctgttggcctcaatgaagacacactgtgtgcctgaagatata
gatataaaagacaccgtgctaaatgatgatgacatcggggacagctgccacgaggatttc
ctccacaaggccatcagctctcatctgcaaacgtgcggctgttcaatcgtggttggaagt
aacccagagaaaataaataagattgtgcggactctctgcctcttcctcactccggccgag
aggaagtgctctcgcctctgcagggcagactcatccttcaaatatgacaccggcctgttt
gttcagggtctgctcaaggactccacaggcagctttgtcctccccttccgccaggtgctt
tactcaccatacccgaccacgcacatcgacgtcgacatcaacacagtcaagcagatgcct
ccgtgccacgagcacacgtacaaccagcggcgctacatgcgatcagagctgagcgcgctg
tggaagactgacagcgaagatgacatacctccagacacaatcattcacacagatgaaacc
ttcacacctgacctgaatatattccaagacgtaatgcataaagacactttggtcaagtca
tttatagatgaggtgttcatgctgaagccgggcttgtccctgcggagcacctatctggcc
cagttcctgctgctgctccacaggaaggccctcacgctgctcaagtacatcgaggacgaa
acgcaaaaagggaaaaagccatttcgatcattgcgtaacctgaagaacgacctgcatctg
acagtggagggagacctgaacatcataatggccttcgccgagaagctgagagcaggactt
cactcgtttgtgtttgggaagcccttctacaccagcatgcaggagcgagacgtgctcatg
agcttttga
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