Amphiprion ocellaris (clown anemonefish): 111562600
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Entry
111562600 CDS
T06018
Symbol
pdgfab
Name
(RefSeq) platelet-derived growth factor alpha polypeptide b isoform X1
KO
K04359
platelet-derived growth factor subunit A
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce04010
MAPK signaling pathway
aoce04020
Calcium signaling pathway
aoce04510
Focal adhesion
aoce04540
Gap junction
aoce04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
aoce04052
]
111562600 (pdgfab)
00536 Glycosaminoglycan binding proteins [BR:
aoce00536
]
111562600 (pdgfab)
Cytokines and neuropeptides [BR:
aoce04052
]
Cytokines
Growth factors (RTK binding)
111562600 (pdgfab)
Glycosaminoglycan binding proteins [BR:
aoce00536
]
Heparan sulfate / Heparin
Growth factors/receptors
111562600 (pdgfab)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDGF_N
PDGF
TraY
Motif
Other DBs
NCBI-GeneID:
111562600
NCBI-ProteinID:
XP_023116990
Ensembl:
ENSAOCG00000027937
LinkDB
All DBs
Position
19:32457816..32476356
Genome browser
AA seq
208 aa
AA seq
DB search
MRAALCSFLLWTTYLLLVTAEEVEFPQELIDRLSHSEIHSISDLQRLLEIDSVGTGNDVI
EEAKYSKHHNHHKNFSRHHGYYNDLKSFQLHSRRKRSIVEEAVPAVCKTRTVIYEIPRSQ
VDPTSANFLIWPPCVEVKRCTGCCNTSNMRCHPSRKHHRTVKVAKVEYVRRRPKLKEVFV
RLEDHLECVCTSQHHVVEHSDAETVDVR
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atgagagccgcactttgctccttcctgctgtggacgacgtacctgctgctggtcaccgct
gaggaagtggagtttccccaggagctgatcgaccgactgtcccacagtgagatccacagc
atcagcgacctccagcggctcctggagattgactccgtaggaacaggaaatgatgtcatc
gaggaggcgaagtacagcaaacaccacaaccaccacaagaacttctctcgtcatcacggt
tactacaatgacctgaagagtttccagctccacagccggcgcaagaggagcattgtagag
gaggcagtcccggcggtgtgtaagacacggacggtgatctatgagattcccaggagccag
gtggatcccacgtcggccaacttcctgatatggccgccctgtgtggaggtgaagcgctgc
acaggctgctgcaacaccagcaacatgcgctgccacccgtcccgcaaacaccaccgcacc
gttaaggtagccaaggtggagtacgtgaggaggagacccaagctgaaggaggtctttgtg
cggttagaagaccacctggagtgtgtctgcacgtcacagcatcacgtggtagagcactcg
gatgcagaaacagtggatgtgaggtga
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