Amphiprion ocellaris (clown anemonefish): 111566221
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Entry
111566221 CDS
T06018
Symbol
cd40
Name
(RefSeq) tumor necrosis factor receptor superfamily member 5 isoform X1
KO
K03160
tumor necrosis factor receptor superfamily member 5
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce04060
Cytokine-cytokine receptor interaction
aoce04514
Cell adhesion molecule (CAM) interaction
aoce04620
Toll-like receptor signaling pathway
aoce04672
Intestinal immune network for IgA production
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
111566221 (cd40)
04514 Cell adhesion molecule (CAM) interaction
111566221 (cd40)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
111566221 (cd40)
04672 Intestinal immune network for IgA production
111566221 (cd40)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
aoce04050
]
111566221 (cd40)
04090 CD molecules [BR:
aoce04090
]
111566221 (cd40)
Cytokine receptors [BR:
aoce04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
111566221 (cd40)
CD molecules [BR:
aoce04090
]
Proteins
111566221 (cd40)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNFR_c6
DUF4501
Glycophorin_A
Endomucin
DUF6480
Orf78
Motif
Other DBs
NCBI-GeneID:
111566221
NCBI-ProteinID:
XP_023122481
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All DBs
Position
8:18918606..18927149
Genome browser
AA seq
290 aa
AA seq
DB search
MSLYLLLLMGAFMVLTTAQPPCDPQTQYEQDGQCCNMCGKGTSMTTFGTCEFPQCTECLD
KEYQEGYTKERLCKRQPYCDPNLNFEVTIHHSKIAKTVCKCKEGFHCASADCKGCLRHKK
CGPGQGAYPKGDHTHDTQCKECPEGTFSNETSWSSSCKTWTPCEEQFYTEEEGTPTSDRK
CAAPSRQHIILAIVVILAVFVVAAVIMIFFCKGRMREKAKPCIELCRGNEHQPLPDTGMK
TPEENDAEQSLLEMSSEGPVTVRGNPVREEDGKSEIVSRQESQPDTCPSF
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgtctttatatctgctgctattgatgggggcttttatggtgttgaccacagctcagccc
ccctgtgacccccagacccagtatgagcaggatggtcagtgctgcaacatgtgtggtaaa
ggaacttccatgacgactttcggcacttgcgagtttcctcagtgcacagaatgtttggac
aaggaatatcaagaaggatacacaaaggaacgcttgtgtaaacggcagccgtactgcgat
ccaaatttaaactttgaggtcacaatccatcacagcaagatagcaaaaaccgtctgcaag
tgtaaagaaggattccactgcgccagtgcagattgtaaaggctgcttgcggcacaaaaaa
tgcggacctggacaaggggcttatcccaaaggtgaccacactcatgacacacagtgtaag
gaatgtccagagggtacattttccaatgagacctcgtggtccagttcctgcaagacatgg
acaccatgtgaggagcaattctacactgaagaggaaggaacgccgacatctgacagaaaa
tgtgcagcaccatcacggcaacatatcatactagcaatcgttgttatattggccgttttt
gtggttgcagctgtaatcatgatcttcttctgcaaaggtcgcatgagggaaaaggcaaag
ccctgcattgaattatgtcggggaaacgaacatcagccacttccagacactgggatgaag
acaccagaggaaaacgacgccgagcaaagtctcctggaaatgagctcagagggtcctgtg
actgtcaggggaaatcctgtgagggaagaggatggaaaaagtgaaatcgtctctagacag
gaatctcaaccagatacatgcccaagtttttaa
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