Amphiprion ocellaris (clown anemonefish): 111567375
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Entry
111567375 CDS
T06018
Symbol
eftud2
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111567375 (eftud2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aoce03041
]
111567375 (eftud2)
Spliceosome [BR:
aoce03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
111567375 (eftud2)
Complex C
U5 SnRNP specific factors
111567375 (eftud2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
EF-G_D2
MMR_HSR1
Ras
Motif
Other DBs
NCBI-GeneID:
111567375
NCBI-ProteinID:
XP_054861470
Ensembl:
ENSAOCG00000023385
LinkDB
All DBs
Position
19:12624603..12648701
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AA seq
971 aa
AA seq
DB search
MEADLYDEFGNYIGPELDSDDDEDDLDADDRDVDEGDEDDDDEPADADDDVPGMEVVLHE
DKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKNRQFTLMEQELPATVYDMEFLAD
LMDGPELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRDDVDLRYTDILFTEQERGVGI
KSTPVTMVLPDSRGKSYLFNIMDTPGHVNFSDEVTSSIRISDGVVLFIDAAEGVMLNTER
LIKHAVQERMAITICINKVDRLIVELKLPPTDAYYKLRHIVDEVNGLLSTYSTDENLVVS
PLLGNVCFASSQYSICFTLGSFAKIYSDTYGDINYNEFAKRLWGDIYFNPKTRKFTKKAP
SSNSQRSFVEFVLEPLYKILSQVVGDVDTSLPRVLDELGIHLTKEELKLNIRPLLRLVCN
RFFGEFTGFVDMCVQHIPSPQEGARNKIEHTYTGGLDSDLGEAMAECDPDGPLMCHTTKM
YSTEDGVQFHAFGRVLSGTIQAGQPVKVLGENYTLEDEEDSQVCTVGRLWISVARYQIEV
NRVPAGNWVLIEGCDQPIVKTATITEPRGNEEAQIFRPLKFNTASVIKIAVEPVNPSELP
KMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVVT
FCETVVETSSLKCFAETPNKKNKVTMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQTK
YDWDLLAARSIWAFGPDTTGPNILVDDTLPSEVDKALLGSVKDSIVQGFQWGTREGPLCD
EPIRNVKFKILDAVIAQEPLHRGGGQVIPTARRVVYSAFLMATPRLMEPYYFVEVQAPAD
CVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFALSVF
HHWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPMLLEL
AKQDVVLNYPM
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atggaggctgatttgtatgatgagtttggaaactacatcggtccagagctggactctgac
gatgatgaagatgatctggatgcggacgacagagatgttgatgagggtgatgaagatgat
gatgatgagccagctgatgctgatgacgatgtacccggaatggaggttgtcttgcacgag
gacaagaagtactatcctacagcagaggaggtttatgggccggaggtggaaactatcgtc
caggaggaagacacacaacctcttacagagcccatcatcaagcctgtgaagaacagacag
ttcactctgatggaacaggagcttcctgctactgtttacgacatggaatttcttgcagac
ctgatggacggtccagagctgatccgtaacgtcaccctctgtggtcacctccatcatggc
aagacctgttttgtggattgcctgatcgaacagacgcacccagaaatcaggaagagagat
gacgtggatctccggtacacagacatcctctttacagaacaggagagaggagttggcatc
aaaagcacgcctgttacaatggttctgcctgactccagaggaaaatcctacctgttcaac
atcatggatacaccaggtcacgtgaacttctctgacgaggtcacgtcaagcatccggatc
tcagacggcgtcgtcctcttcatagacgcagcagaaggagtgatgctgaacacagagcgt
ctgatcaaacatgcggttcaggagcgtatggccatcaccatctgcatcaacaaggtggat
cggctcatcgtggagctcaagctgcctcccacagacgcttattataaactgcggcacatc
gtggacgaggtcaacggtttgctcagcacatactccacagatgagaacctggtggtgtct
cctctccttgggaatgtttgcttcgccagctctcagtacagcatctgcttcaccctgggg
tcctttgcaaagatctactcggacacatatggtgacattaactacaatgagtttgccaag
aggctctggggagacatttatttcaaccccaaaactcgcaagttcaccaagaaagctccc
agcagcaactctcaacgcagctttgtggagtttgtcctggagcctctttacaagatcctc
tcacaggtggttggagatgtggacacgtcgctcccccgagttctggacgagctgggaatc
cacctgacgaaggaggagctgaagctcaacatcagaccgctgctgaggctcgtctgcaac
cgcttctttggagagttcactggctttgtggacatgtgtgtgcagcacatcccctcacca
caggagggcgccaggaacaagatagagcacacctacactggtggtttggactcggacttg
ggggaagccatggcagagtgcgatcctgatggtccgttaatgtgccacaccactaagatg
tacagcaccgaggacggggttcagttccatgcgtttggtcgggttctgagcggaaccatt
caggctggtcaacctgtcaaggttttaggagaaaactacactctggaagacgaggaggac
tctcaggtctgcactgtgggtcgactctggatctctgtggccagataccagattgaggtg
aatcgagtgcctgcaggtaactgggttctcattgagggttgtgaccagccgatcgtcaaa
actgccacgatcacagagcccagagggaatgaagaggctcaaatcttcaggccgctgaag
ttcaacacagcttcagtcattaagatcgcagtggagccggtgaacccgtcagagctgccc
aagatgctggatggactgaggaaggtcaacaagagctacccgtccctcaccaccaaggtg
gaggagtctggagaacacgttatcttgggaacaggagaactgtacctggactgtgtcatg
cacgacctgcggaagatgtactccgagatcgacattaaggtcgccgacccggttgtgact
ttctgtgaaaccgttgtggagacgtcatctctcaagtgctttgctgagactccaaacaaa
aagaataaggtcacgatgatcgctgagcccctggagaaagggctggccgaggacatcgag
aacgaagtggtgcagatcacatggaacaggaagaagctgggagagtttttccagaccaag
tacgactgggatctgctggctgccaggtccatctgggccttcggacccgacacaacggga
ccgaacatcctggtagacgacacgctgccatctgaggtggacaaggcactgctcggttca
gtcaaagacagcatcgttcagggcttccagtggggaaccagagaaggtcctttatgtgac
gaacccatcaggaacgtaaagtttaagatcctggatgccgtcatcgctcaggagcccctc
caccgaggaggaggccaggtcatccccacagccaggagggtggtttactctgctttcctc
atggccactccgaggctgatggagccgtattactttgtggaagttcaggctccggctgat
tgtgtttctgcggtttacacagtgctggctcgaagaaggggtcacgtcacccaggacgct
cctattccgggctctcctctctacacaattaaagctttcattcccgccatcgactccttc
ggcttcgagacggaccttcgaacacatacgcagggtcaggccttcgctctgtcggtcttc
caccactggcagatcgtccctggagaccccctggacaagagtatagtgatccggcctctg
gagcctcagccggccccccatctagccagagagttcatgatcaagacccgaaggcgcaag
ggtctgagcgaagacgtgagcatcagcaagttcttcgacgatcccatgttgttggagttg
gcgaagcaagacgtggtgcttaactatccaatgtga
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