Amphiprion ocellaris (clown anemonefish): 111567879
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Entry
111567879 CDS
T06018
Symbol
tdg.1
Name
(RefSeq) thymine DNA glycosylase, tandem duplicate 1 isoform X1
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
111567879 (tdg.1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aoce03400
]
111567879 (tdg.1)
Enzymes [BR:
aoce01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
111567879 (tdg.1)
DNA repair and recombination proteins [BR:
aoce03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
111567879 (tdg.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
LppA
Ribosomal_L19e
Motif
Other DBs
NCBI-GeneID:
111567879
NCBI-ProteinID:
XP_023125008
Ensembl:
ENSAOCG00000027766
UniProt:
A0AAQ5XC24
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Position
3:complement(21694768..21701933)
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AA seq
448 aa
AA seq
DB search
MEEKLNGSLPVVSPEYLHQWVQSAQQFQALQAQYSNFSRNHQFHYPENQPGEADMANPEP
MMDQQEPANLTKPPAKKRGRPAQPKEPKAPKPPKVPKAAKPPKDPNAPKAKPGPKPKKAT
EPPADGKQEKIDETFKKVKRKVDRFKGMSEEEVMKKTLPDLLDYNLDYVIIGINPGLMAA
FIGRWFPGPGNHFWKCLFLSGFTEEQLNHMHDSTLPAKYKMGFTNMVARATPGSKDLSSK
ELREGGKILVEKLKKYKPLIAVFNGKCIYEMFCRELFGKKPKTLEFGLQPHKIPDCDVAL
YLMPSSSARCAQFPRAQDKVHFYIKLRELRDQLKGVQRSTEIQEVNYSFDLNLAKEDAKR
MAIKEEQYDPGYEDAYGGAYAERGPEEGQADGKTNGHCTFSTAENTEGAQEATTSQTSEG
QLPDGQWMTQSFADQIPDISGGPKDSSI
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaaagctgaatggatcactgccggttgtctccccagagtatcttcatcagtgg
gttcagtctgcccagcagtttcaggctctccaggcccaatactcaaacttcagccgcaac
catcagttccactacccagagaatcagcctggagaggcagacatggcgaatccagaaccc
atgatggatcagcaggaaccagccaacctgacaaaacccccagccaaaaagagaggcaga
ccagctcagcccaaggaaccaaaggcacccaaaccgccaaaagtccccaaggcagcaaag
ccacctaaggacccaaatgcacctaaagcaaaaccaggtccaaagcctaagaaggccact
gaacctccagctgatggcaaacaggaaaagattgatgagaccttcaagaaggtaaagagg
aaagtggaccgtttcaaaggaatgtcggaggaagaggtcatgaagaagactctgccagat
ctgctggactacaacctggactatgtcattattggtattaatccaggcctgatggcagct
ttcattggacgatggttcccaggtcctggaaatcatttttggaagtgcctgtttctctct
ggatttactgaggagcaactcaaccacatgcatgacagcaccctgcctgctaagtacaaa
atgggcttcaccaacatggtagccagggcaacaccaggaagcaaagacctttcaagcaaa
gagctgcgtgaaggaggcaaaattctcgtggagaagttgaaaaagtacaagccccttatt
gcagtgtttaatggaaaatgcatctatgaaatgttctgcagagagctgtttggcaaaaaa
cccaaaactcttgaatttggtttacagccccacaagattcctgactgtgatgtggctctg
tatctgatgccttcgtccagcgctcgttgtgcccagttcccacgtgctcaggacaaagtc
cacttctacatcaaactgagggagctcagagatcagctgaagggtgtccaaagaagcact
gagatccaggaggttaactactcatttgaccttaatttggccaaggaggatgccaagagg
atggcgataaaggaggagcagtatgatccagggtatgaagatgcctatggtggagcctat
gcagaacgaggacctgaagagggccaggctgacggcaagacaaacggtcactgtacattc
tcaactgccgaaaacacagaaggagcacaggaagcgaccacgtcacagacatcagaagga
cagctaccagacggacagtggatgacccagtcgtttgcagatcagattccagacataagt
ggtggaccaaaggacagcagcatatga
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