Amphiprion ocellaris (clown anemonefish): 111567882
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Entry
111567882 CDS
T06018
Symbol
tdg.2
Name
(RefSeq) G/T mismatch-specific thymine DNA glycosylase isoform X1
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
111567882 (tdg.2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aoce03400
]
111567882 (tdg.2)
Enzymes [BR:
aoce01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
111567882 (tdg.2)
DNA repair and recombination proteins [BR:
aoce03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
111567882 (tdg.2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
AT_hook
Bul1_N
Motif
Other DBs
NCBI-GeneID:
111567882
NCBI-ProteinID:
XP_023125015
Ensembl:
ENSAOCG00000023345
LinkDB
All DBs
Position
3:complement(21702737..21708626)
Genome browser
AA seq
427 aa
AA seq
DB search
MLIYSNKSTVKMEENQFTSLTVPTDYFQQWYQSSQQHPEAQHVLPYHNVGRYTEGPIEEP
VMTELSVHRDPPLYQESFYQSYPPASNHYQEQTYQQNVREQQQQQQQHYSATLHHSQHQH
TIQQQEASIQHQLQPAAPPQVVTPVKKKRGRPPKQQAEDGETQEEEDEIEAAKKAKRALN
RFNGMSVAEVMAKTLPDVITYNLDILIIGINPGLLSAFKGHHYPNPGNHFWKCLFLSGLT
DEQLNYMHDQSLPEKYSIGFTNMVERTTPGSKDLSSKEIREGGRQLLDKLQKYKPLIAAF
NGKGIYEIFCKETFGVKAKNLEFGLQPYKIPETETVCYLMPSSSPRCAQFPRAQDKVHFY
IKLKELRDQMKGMAPGHEVVETQYSFDLQLAKEDAKRIAIKEEQVDPEYDSYSGLHDDVR
QSSNFSN
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgttaatatattcaaataagtcaacagttaagatggaggaaaaccagtttacatcattg
acggttcctacggattattttcagcagtggtaccagtccagccagcagcaccctgaggcg
caacatgtgctgccatatcacaacgtgggccgttacacagaaggtcccatagaggagcct
gtcatgacggagctatctgtccatcgggatccacctctttaccaggaaagtttttaccag
agctaccctccagcctcaaatcactaccaggagcagacctaccagcagaatgtcagggag
cagcagcagcagcagcagcagcattatagtgccaccctgcaccactctcagcatcaacat
acaatacagcagcaggaagcgagcattcagcaccagcttcagcctgctgctccacctcaa
gttgtgacaccggtgaagaagaaaagaggccgccctcctaaacagcaggcggaggatggt
gagacgcaggaggaggaggatgagattgaggctgctaaaaaagccaagagggctctcaac
cgcttcaatggcatgtcggtggctgaagtcatggccaaaaccctgccagatgttattacc
tacaatcttgacatcttgataattggaattaacccaggactattgtcagccttcaaagga
caccattacccaaacccaggaaaccatttctggaaatgtctgtttttgtctggtctaact
gatgagcagctaaactacatgcacgaccagagcctgccagagaagtacagcatcggcttc
accaacatggtagaaaggaccacacctggcagcaaggacctctccagtaaggagattcgt
gaaggagggcgtcaattacttgacaagctgcagaaatacaagccattaatagcagctttt
aatggaaaaggtatttatgaaatcttttgcaaagaaacctttggtgtgaaggccaagaac
ctcgagtttggtctacagccctacaaaatcccagaaactgaaacggtgtgctacttaatg
ccatcatcaagcccccgctgtgcccagtttccccgtgctcaagataaagtacatttctac
atcaagctgaaggaactgcgagaccagatgaaaggcatggcacccggccatgaggtggtg
gagacacagtactctttcgacctgcagctggctaaagaggatgcaaagaggattgcaatc
aaagaggagcaggtggatccagaatacgacagttatagtgggctgcatgatgacgtgagg
caaagcagcaacttctccaactaa
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