Amphiprion ocellaris (clown anemonefish): 111569212
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Entry
111569212 CDS
T06018
Symbol
trpm4a
Name
(RefSeq) transient receptor potential cation channel subfamily M member 4a
KO
K04979
transient receptor potential cation channel subfamily M member 4
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
aoce04040
]
111569212 (trpm4a)
Ion channels [BR:
aoce04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
111569212 (trpm4a)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LSDAT_euk
LSDAT_prok
Ion_trans
Motif
Other DBs
NCBI-GeneID:
111569212
NCBI-ProteinID:
XP_054861097
Ensembl:
ENSAOCG00000017766
UniProt:
A0AAQ5XTZ4
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Position
19:complement(33124310..33167926)
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AA seq
1264 aa
AA seq
DB search
MSELSKDRDGGGGKSGSKKEKDQSWIPKIIKKRVCTTFVEDSFSNGGYCQCGGVRDAHDS
VATVDFFGAAIVTQWDSRQHSSESPTDAFGELEFTGAGRRHSNFLRLSCDTPPQIVYTLM
TAHWNLPSPNLVVSVVGGEGHEKIKTWVRDVLRNGLVRAAQSTGAWILTGGLREGVARCV
GEAVRDHGAAAPALCHKKVIAVGLAPWGLVHNRQQLVNAKGSFPARYYVQNTSRDSCCLD
NNCQAFLLVDDGSIGRRGGETAFRASLEDYISHQRTGIWGSGSIEIPVLCMLISGDASML
ERLDASLRKATPWLVLAGSGPAADLINELLVDLPSVPLSPASPPVEGEAAEGPSPELRDR
VREKVRRQFPSEAKAEAELDRLVDSALSIYQNRELITVFHGEQEGSDDFDTVLLKALVRA
SKRVSSEASECTEELKLAVAWNRVDIAKTELFNGDIQWKYDDLEDSMTDALVNDKPQFVR
LFCENGLNILDYLTYQRLESLYRSLADSSLAYILLQRRLNERQNLAGSPPNPDGPGSPLK
SPLSALTGPASATELSLYEVSRLLWDLLGDVCQPFYYGPLELKPKTSTRKALKHVNKLLL
GECRYQNQRCSSPWEALFIWAVLQNRSEMAVYFWEMAGESVLSALGGCKMLRELSKLESE
TENKLAMKELAQKFENLAQDVFGECYQNSESRSFTLLIRKSPVWGGATCLQMATAADARL
FFSHDGVQSLLSQIWWGDMDRSTEVWKLVLTFFLPPLLYTNLISFREQEEEVKSVGIRDT
DSLDGNDANDNTVFSLADIIQTNEDAEEYRALKENPEGSASSTSKRSFTVSRWRQFWFAP
VTSFLGNVLMYFLFLCLFAYVLLVDFKPPPPDGPATLEFVLYFWVFTLVCEEIRQSFFVG
STFVLQRIRNYIQDVWNKCDLTAIALFILALCCRMFPWSYDFGRAVMAIDYMVFTLRLIH
IFAIHKQLGPKIIIVGKMVKDVFFFLFFLAVWLMAYGVANQALLYSYDPRPNWIFRRVFY
RPYLHIFGQIPINEMDADKWEEVNCTNNAAEIEAGAEPCLSTYANWLVVILLVIYLLFTN
IVLVNLLIAMFSYTFSKVQERSDTYWKFQRYNLIVEYHSRPCLAPPFIIISHLHLFIKRY
IRGITSVKVKHFALELRSRKASRLNTWEAIQKENLLSAQNKKQRESDTARLRHTSVKVDS
VLKQMAEIRDHDRRMRLLETEMEYCCSALSWMADALSQSSLIKAGRPPPQLRDLPPLSPS
SQTS
NT seq
3795 nt
NT seq
+upstream
nt +downstream
nt
atgtcggagctgagcaaggaccgggacggaggaggaggaaagtccggcagcaagaaggag
aaggaccagagctggattccaaagatcatcaagaagagagtgtgcaccacctttgttgaa
gactctttcagtaatggaggatactgtcagtgtgggggcgtccgagacgctcacgactcc
gtggccaccgtggatttctttggagccgccattgtcacccagtgggacagcagacagcat
tcctcagagagtcccaccgatgccttcggagagctggagttcactggagctggacggaga
cacagtaacttcctgcggctgtcctgtgacaccccccctcagatcgtctacaccctgatg
acggcccactggaacctgccttcacccaacctggtggtgtcggtggtggggggcgaaggc
cacgagaagatcaagacatgggtgagagacgtgctgaggaatgggctggtcagagctgct
cagagcacaggggcctggatcctgactgggggcctgagggagggcgtggcccgctgtgtg
ggggaggcggtgagggaccacggcgctgcagctccagctctctgccataagaaggtgatc
gccgtgggtttggctccatggggtttggtccacaaccggcaacagctggtcaacgccaag
ggcagctttcctgctcggtattacgtccagaacacgtcccgggactcctgctgcctggac
aacaactgccaggcgttcctcctggtggacgacgggagcatcggccggcggggaggagag
accgccttcagggccagtctggaggactacatctcccatcagcgcaccggcatctggggt
agcggcagcattgagatcccggttctctgcatgctgatctctggagacgccagcatgctg
gagaggttagacgcctccctgaggaaggctacgccctggttggttctggccggttctggt
ccagctgcagatctgatcaatgagctgctggtggacctcccctccgtccccctcagccct
gcctcccccccagtagagggggaggcggctgagggtccgagtccagagctcagggaccgg
gtccgagagaaggtccggagacagtttccatctgaagctaaagctgaagccgagctggac
agactggtggacagcgctctgagtatttaccaaaaccgagagctcatcacagtttttcat
ggagaacaggagggttctgatgactttgatacggttctcctcaaagccctggttagagcc
agtaaacgtgtttccagtgaagccagcgaatgcactgaagagctgaagctggccgtggcc
tggaatcgggtggacatcgctaaaacggagctcttcaacggagacatccagtggaagtac
gacgacctggaggactccatgaccgacgccctcgtcaacgacaagccccagtttgtgcgt
ctgttctgtgagaacgggctgaacatcctggactacctgacctaccagcgcctggagagc
ttgtaccgctcgctggccgacagctctctggcctacatcctcctccagaggcgtctgaac
gagaggcagaacctggccggatctcctccaaacccagatggtcctggatcaccgctgaag
agtccgctgagtgctctgaccggaccggcttcagccacggagctcagcctgtacgaggtc
tcccgtctgctctgggacctcctgggtgacgtctgccagccgttttattacggacctctt
gagctgaaacccaaaaccagcaccagaaaggctctgaagcacgtcaacaagctgctgctg
ggggagtgtcgctaccagaaccagcgctgctcctccccctgggaagccctcttcatctgg
gccgtcctgcagaaccgcagtgaaatggcggtttacttctgggagatggctggagagtcg
gtgctgagcgctctgggcggctgtaagatgctcagggagctttcaaagcttgaaagtgag
acggagaacaaactggccatgaaggaactggctcagaagtttgagaacctggcacaagat
gtcttcggtgagtgctaccagaacagcgagagtcgctccttcactctcctcatcaggaag
tctccagtgtggggcggagctacctgcctgcagatggccacagcggccgacgctcgactg
ttcttcagccacgacggtgttcagtctctgctgtctcagatctggtggggcgacatggac
agaagcactgaagtctggaaactggtcctgaccttcttcctgcctcctctgctgtacacg
aacctcatcagcttcagggagcaggaggaggaggtgaagtctgtggggatcagagacacc
gacagtctggatggaaacgatgccaacgacaacaccgtcttttctttggctgacatcatc
caaacgaacgaagatgcagaggagtacagggctctgaaagaaaacccagaaggttctgct
tcatccacctccaaaagatcgttcactgtgtcgcggtggagacagttctggttcgctccc
gtcacctcattcctcggcaacgtgctgatgtacttcctgttcctttgcctgttcgcctac
gttttgttggtggacttcaaaccgccgcctccagacggtcctgccactctggagtttgtg
ctttacttctgggttttcaccttagtctgtgaagagatccggcagagcttctttgtgggc
agcacatttgtcctccagaggatcaggaactacatccaggatgtgtggaacaaatgtgac
ctgacggccatcgctctcttcattctggctctgtgctgcagaatgtttccctggtcgtat
gattttggccgagctgtgatggccatagattatatggtctttacgctacgtctgatccat
atctttgctatccacaaacagctcggacccaagattatcattgttggcaaaatggtcaaa
gatgttttcttcttcctgttttttctggcggtttggctcatggcctatggagtggccaat
caggcgctcctctactcatatgatcctcgccctaactggatatttcgcagagtcttctac
agaccatatctgcacatttttggacagatacccattaatgaaatggatgctgataaatgg
gaggaggtaaactgtacaaacaatgctgcagagattgaagccggagcagagccttgtctg
agcacctacgctaactggctggtggtcatcctcctagtcatctacctgctgttcaccaac
atagttctggtcaacctgctcatcgccatgttcagctacaccttctccaaagtgcaggag
cgcagcgacacctactggaagtttcagcgttacaacctgatagtggagtaccactcacgg
ccctgcctggctccacccttcatcatcatctcacacctccacctgttcataaagagatac
atccgcggcatcacctccgttaaagtgaaacactttgctctggagctacgcagcagaaaa
gcaagtcgactcaacacatgggaagcaatccagaaggaaaatctcctctcagctcagaac
aagaagcagagggagagcgacacggccagactcagacacacttcggtcaaggtggacagt
gtgttgaagcagatggcagagatccgagaccatgaccgaaggatgcgtttgctggagaca
gagatggagtactgctgcagcgccctctcctggatggccgacgctctgtctcagagcagc
ctgatcaaagccggccggcctcctcctcagctcagagatcttcctcctctttctccgagc
tcacagacgtcatag
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