Amphiprion ocellaris (clown anemonefish): 111571002
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Entry
111571002 CDS
T06018
Symbol
traf6
Name
(RefSeq) TNF receptor-associated factor 6
KO
K03175
TNF receptor-associated factor 6 [EC:
2.3.2.27
]
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce04010
MAPK signaling pathway
aoce04120
Ubiquitin mediated proteolysis
aoce04140
Autophagy - animal
aoce04144
Endocytosis
aoce04620
Toll-like receptor signaling pathway
aoce04621
NOD-like receptor signaling pathway
aoce04622
RIG-I-like receptor signaling pathway
aoce05132
Salmonella infection
aoce05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
111571002 (traf6)
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
111571002 (traf6)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
111571002 (traf6)
04140 Autophagy - animal
111571002 (traf6)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
111571002 (traf6)
04621 NOD-like receptor signaling pathway
111571002 (traf6)
04622 RIG-I-like receptor signaling pathway
111571002 (traf6)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
111571002 (traf6)
09171 Infectious disease: bacterial
05132 Salmonella infection
111571002 (traf6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aoce04131
]
111571002 (traf6)
04121 Ubiquitin system [BR:
aoce04121
]
111571002 (traf6)
Enzymes [BR:
aoce01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111571002 (traf6)
Membrane trafficking [BR:
aoce04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
111571002 (traf6)
Ubiquitin system [BR:
aoce04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
111571002 (traf6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_UBOX
zf-C3HC4_3
zf-C3HC4_4
TRAF6_Z2
zf-RING_5
TRAF3_RING
RING_XB3-XBAT31
U-box
zf-TRAF_2
DM
BLI1
DUF7310
CEP104_ZnF
Motif
Other DBs
NCBI-GeneID:
111571002
NCBI-ProteinID:
XP_023129805
Ensembl:
ENSAOCG00000028500
LinkDB
All DBs
Position
1:40364117..40376755
Genome browser
AA seq
568 aa
AA seq
DB search
MACFESNKGSLEEDSYEGAVGGELSSCALAMMEKERESLLSPSESPGTFISSSSNSFQAA
PLQGYDVEFDPPLESKYECPICLMALRNAIQTRCGHRFCKSCIEKSIRDTGQRCPVDNEM
LSEDQLFPDNFAKREILSLTVRCPNSGCTEKMELRHLESHLEQCQFATAPCSQCQQSVRK
SHLEEHTTVECQRRPVSCPDCVTSFVYEERELHEQQCPFASVKCQYCEMDLIRDQMASHC
DTDCPKAPITCNFSIFGCKERMQRHNLAQHMQEFTQMHMRYMAEFLRGLSLNGTTPKPLW
PLGPSVSTEDQGAAAPVSACGGPRGPASCSSNCTQPSEEMQRLREMDGRLVKQDHQLREL
IILKETQAGQLAELRRRVSMLEETVKELEAQQCHGIFIWRLRGFSAHLRNQEAGLPVVEH
SPGFYTGRPGYKLCLRLHLQTPNAPRCSNYISLFVHTMQGAFDGQLTWPFQGTIRLAILD
QGPEGLHHMEVMETKPDLQAFQKPTNQRNPKGFGYVTFMHLHQLSQRAFVKDDTLLIRCE
VTPRFDSTVHREGPTVQPRGPEASLSRD
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atggcttgctttgaaagcaataagggcagtttggaggaggacagctatgaaggagcagtc
ggtggagagctgtccagctgcgccttggccatgatggagaaagaacgagaatccctcctc
agcccttcagagagccctggtaccttcatcagcagctcctccaatagcttccaggctgcc
cctcttcagggctacgacgtggagtttgacccacccttagagagcaaatatgagtgcccc
atttgcctcatggctctgaggaacgccatccaaacgcgctgcggtcaccgtttctgcaag
agctgcatcgagaagtccattcgcgatacaggacagcggtgccctgtggacaacgaaatg
ctgtcagaagatcaactgtttcctgataactttgccaaaagggagatcctatcgctaact
gttcgctgtccaaactctggctgcaccgagaaaatggagctccgacatttagagagtcat
ttggaacagtgtcagttcgccacggcgccttgctcacagtgccagcagtcggtgagaaag
agccacctagaggagcacacaactgttgagtgccaaagaagacctgtgtcgtgcccagat
tgtgtgacatcttttgtttacgaggagagagagcttcacgagcagcagtgtccctttgcc
agcgtgaagtgccagtactgtgagatggatctcatcagagaccagatggcatctcactgt
gacacagattgccccaaagcacccatcacctgtaactttagcatctttggatgtaaagaa
aggatgcagcgccacaacctggctcagcacatgcaggagttcactcagatgcacatgcgc
tacatggcggagtttttgcgtggcctcagcctcaacggcaccacacccaagccgctgtgg
cctctcggaccttctgtttccaccgaggatcagggagctgcggcgccggtatcggcctgc
ggcggacccagaggacccgcgagctgcagcagcaactgcactcagcccagcgaggagatg
cagaggctccgagagatggacggacggctggtgaagcaggaccatcagctgcgggagctc
atcatcttaaaggaaacacaggccggccagcttgcagagctcaggcgcagggtttccatg
ctggaggagacggtgaaggagctggaggcccagcagtgccacggcatcttcatctggcgc
ctccgaggcttctctgcccacctgaggaaccaagaagcgggcctccccgtggtcgagcac
agccccggcttctacaccggccgcccgggctacaagctgtgcctccgtttgcacctgcag
acccccaacgccccacgctgctccaactacatctccctcttcgtccacaccatgcagggg
gcgttcgacgggcagctgacgtggccgtttcaagggaccatccggctggccatcctggac
cagggccccgagggtctgcatcacatggaggtgatggagacgaagccggatctgcaggcg
ttccagaaacccaccaaccagcgcaaccccaaaggattcggctacgtcaccttcatgcac
ttgcaccagctgagtcagagggcgttcgttaaagacgacacgctgctgatccgctgcgag
gtgacgccacgttttgacagtacggttcaccgcgaggggccgacggtgcagcctcgagga
cccgaagcgtcactttcaagggactaa
DBGET
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