Amphiprion ocellaris (clown anemonefish): 111571414
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Entry
111571414 CDS
T06018
Symbol
snrpb
Name
(RefSeq) small nuclear ribonucleoprotein-associated proteins B and B'
KO
K11086
small nuclear ribonucleoprotein B and B'
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111571414 (snrpb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aoce03019
]
111571414 (snrpb)
03041 Spliceosome [BR:
aoce03041
]
111571414 (snrpb)
03032 DNA replication proteins [BR:
aoce03032
]
111571414 (snrpb)
Messenger RNA biogenesis [BR:
aoce03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
111571414 (snrpb)
Spliceosome [BR:
aoce03041
]
Complex A
U1 snRNP components
Sm proteins
111571414 (snrpb)
U2 snRNP components
111571414 (snrpb)
Complex B
U1 snRNP components
111571414 (snrpb)
U4/U6.U5 tri-snRNP components
111571414 (snrpb)
Complex C
U2 snRNP components
111571414 (snrpb)
DNA replication proteins [BR:
aoce03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
111571414 (snrpb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
111571414
NCBI-ProteinID:
XP_023130308
Ensembl:
ENSAOCG00000006876
UniProt:
A0A3Q1B0C9
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All DBs
Position
5:39891084..39896371
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AA seq
240 aa
AA seq
DB search
MTVGKSSKMLQHIDFRMRCILQDGRIFIGTFKAFDKHMNLILCDCDEFRKIKPKNSKQPE
REEKRVLGLVLLRGENLVSMTVEGPPPKDTGIARVPLAGVAGGPGVGRAAGRGVPAGAPM
PQAPAGLAGPVRGVGGPSQQVMTPQGRGTVAAAAAGASIAGAPTQYPPGRGAPPPMGRGA
PPPGMMGPPPGMRPPMGPPMGMPPGPGRGAPMGMPPPGMRPPPPGMRGPPPPGLRPPPRP
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgacggtgggtaagagcagtaagatgctgcagcacatcgacttcaggatgaggtgcatc
ctgcaggacggccgcatcttcatcggcaccttcaaggccttcgacaaacacatgaacctg
atcctgtgcgactgcgacgagttcaggaagatcaaaccaaagaactcgaagcagccggag
cgtgaggagaagcgggttctgggtctggttctgctgcggggggagaaccttgtctccatg
acggtggaaggtccgccccctaaagacacggggatcgcccgggtgccactggcgggcgtg
gccgggggtccaggtgtgggccgggcggcaggtcgcggcgttcctgctggagctccgatg
cctcaggctccggctgggctggcggggcccgtcagaggagtgggcggcccctcgcagcag
gtgatgaccccccagggcagagggacggttgctgcggcagcagcaggagccagcatcgcc
ggggcaccgacgcagtacccacctggacgaggagccccgccaccgatgggcagaggagcc
ccgcctccaggtatgatgggcccgccccctggcatgcggcccccgatgggtcctccaatg
gggatgccccctggtcccggtcgaggcgctccgatggggatgccccctccagggatgagg
ccgcccccccctggcatgagaggaccgccccctcccgggttgagaccgccccctcgcccc
tga
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