Amphiprion ocellaris (clown anemonefish): 111575617
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Entry
111575617 CDS
T06018
Name
(RefSeq) HLA class II histocompatibility antigen, DR alpha chain-like
KO
K06752
MHC class II antigen
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce04145
Phagosome
aoce04514
Cell adhesion molecules
aoce04672
Intestinal immune network for IgA production
aoce05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
111575617
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
111575617
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
111575617
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
111575617
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aoce04147
]
111575617
Exosome [BR:
aoce04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
111575617
Exosomal proteins of epithelial cells
111575617
Exosomal proteins of breast milk
111575617
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C1-set
MHC_II_alpha
Ig_3
C2-set_2
C2-set_3
Ig_2
I-set
Motif
Other DBs
NCBI-GeneID:
111575617
NCBI-ProteinID:
XP_023136620
Ensembl:
ENSAOCG00000020983
UniProt:
A0A3Q1CQE4
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Position
23:12524368..12527027
Genome browser
AA seq
237 aa
AA seq
DB search
MKMSKLLLILCCVLGVSSDVLHEGGQIGGCSDSNGEMMYTLEGEELWYADFKYGTGVTPQ
PDFIDPISFPEGTYEEAVADLQICKTNLQVCRQAMKDLPVEQDPPEPPIIYIRDALELKV
KNTLICHVTGFYPAPVEVFWTKNGKDVTDGTSINVPSPNKDGSFTQISRLEFIPQLGDIY
SCSVEHVALSEPLTAIWDVRTTPPSVGPLVFCGAGLTVGLVGVAAGIFFFIKGHKRS
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgtccaagctgctcctcatcctctgttgtgtcctcggggtctcttctgatgtt
ctacatgagggcggtcagatcggtggctgttcagactctaatggagagatgatgtacaca
ctggagggtgaagaactttggtacgcagacttcaagtacgggacaggagtcacgcctcag
ccagacttcatagatcccattagtttccctgaaggaacttacgaagaagctgtagctgat
ctacaaatctgcaaaactaacctgcaagtatgtcgccaggcgatgaaggacctgccagtg
gaacaggatcctcctgagcccccgataatctacatcagagacgccttggagctcaaagtg
aagaacaccctcatctgtcatgtgactggtttctatcctgctccggtcgaagtcttctgg
accaagaacggaaaagatgtgaccgacggaaccagcatcaacgtcccctcccccaacaaa
gatggttccttcacccagatctccagactggagttcatcccacagctgggagacatctac
agctgttcagtggaacatgtggccctgagcgaaccactgaccgcaatctgggatgtgagg
acgactccgcccagtgttggacctctagtgttctgtggagctggtctcacagtcggtctg
gtcggtgtggcagctggaatcttcttctttatcaaaggacacaagcgcagctga
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