Amphiprion ocellaris (clown anemonefish): 111576450
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Entry
111576450 CDS
T06018
Symbol
traf3
Name
(RefSeq) TNF receptor-associated factor 3
KO
K03174
TNF receptor-associated factor 3
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce04620
Toll-like receptor signaling pathway
aoce04621
NOD-like receptor signaling pathway
aoce04622
RIG-I-like receptor signaling pathway
aoce05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
111576450 (traf3)
04621 NOD-like receptor signaling pathway
111576450 (traf3)
04622 RIG-I-like receptor signaling pathway
111576450 (traf3)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
111576450 (traf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
TRAF3_RING
zf-C3HC4
zf-C3HC4_2
zf-RING_4
zf-C3HC4_4
Sina_ZnF
RING_XB3-XBAT31
ATG16
zf-TRAF_2
zf-RING_UBOX
MctB
CCDC113_CCDC96_CC
DUF724
Baculo_PEP_C
NDC80_loop
KxDL
FlaC_arch
GAS
FapA
Fez1
Motif
Other DBs
NCBI-GeneID:
111576450
NCBI-ProteinID:
XP_023137893
Ensembl:
ENSAOCG00000013403
LinkDB
All DBs
Position
20:complement(30795124..30815896)
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AA seq
595 aa
AA seq
DB search
MSAGRSADGREVQIPLQQVAPSLIPPLSAAPPITPPSHRPANPWPLIESAAQQGVPAGFL
PLHGGFRDHFVETPEAKYCCEACRLVLCQPRQTECGHRFCQSCINDILSHQNPMCPADRE
PLFKDKIFRDVCCHREIMALKVYCRSEANGCQEQMSLQQIPDHLNVCPFFEVPCPLGKCK
ERMMRKEIPDHLSWKCKHRETTCEFCATKMPLTDLQKHKETVCPAFPVSCPNHCSFSSLP
RSELSSHQHDCPKAQVSCQFHRYGCTFKGLNQDMRQHESTFAAEHLRMMANRNCSLENKM
EDVKGELMERYKVLPALSSRLSELENQNEELREKNRQMEQKLATMQKLMSSHSEKLLEVE
LELRSLRLLRDEVENLRGTLENVRTRLSALEQGGRSGSGSTTHTLASLENQLSRHDDMLS
VHEIRLADMDLRFQVLETASYNGTLIWKIRDYKRRKQDAVAAKTLSLYSQPFYTGYFGYK
MCARVYLNGDGMGKGTHLSLFFVVMRGEYDALLPWPFKQKVTLMLMDQGSSRKHLGDAFK
PDPNSSSFRRPSAEMNIASGCPLFVSQSVLEAGSYIKDDTIFIKVTVDTSDLPDP
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcggggaggagtgctgacgggagggaggtgcagattcccctccagcaggtggcg
ccctcccttatcccgcccctctcagcagcccctcccatcaccccgccctctcaccgccca
gccaatccctggcctctgatcgagtccgcagcccaacaaggtgtgcctgcaggtttcctg
cctctgcatggaggattcagagatcattttgtagaaactccagaagccaaatactgctgc
gaggcctgcaggctggtcctgtgtcagccccggcagaccgagtgtggccaccgcttctgt
cagagctgcatcaacgacatcctcagccatcagaacccgatgtgtccagctgacagggag
cctctgtttaaagacaagatcttcagagacgtttgctgccatcgggagatcatggcgctg
aaggtttactgtcgcagcgaagcaaacggctgtcaggagcagatgagtctgcagcagata
cctgaccacctgaacgtgtgtccgttctttgaggttccctgtccgctcggtaaatgtaag
gagcgaatgatgagaaaggagattcccgaccacctgagctggaagtgtaaacacagagag
accacctgcgagttctgcgctaccaagatgcccttgactgacctgcagaaacacaaagag
acagtttgtccagcgtttccagtgtcgtgtcccaaccactgttcgttctcctccctgccc
cggagcgagctgtcgagccaccagcacgactgtcccaaagctcaggtcagctgtcagttc
caccgctatggctgcacattcaagggtttgaaccaggacatgaggcaacatgagtccacc
ttcgcagctgaacacctgagaatgatggccaataggaactgctcgttagagaacaagatg
gaggatgtgaaaggtgagctgatggagaggtacaaggtgcttcctgctctcagcagccga
ctgtccgaactggagaaccagaacgaggagctgcgagaaaagaaccggcagatggagcag
aaactggccaccatgcagaaactaatgagctctcactcagagaagctgctggaggtggag
ctggagcttcgttccctccgtctgctcagagacgaggtggagaacctgcgaggaaccctg
gagaacgtccggacgaggctcagcgccctggaacaaggaggacgcagcggaagtggatcc
acgacacacactctggcctccctggagaatcagctcagtcgccacgacgacatgctgagc
gtccacgagatccgattggccgacatggacctgcgcttccaggtgctggagacggcgagc
tacaacgggactctaatctggaagatccgcgactacaagagacggaaacaggacgccgtg
gcggccaagacgctgtcgctgtactcgcagccgttttacaccggatacttcggctacaag
atgtgcgctcgagtttacctgaatggagacgggatgggcaagggcacgcacctgtcgctg
ttctttgtggtgatgaggggcgagtacgacgccctgctgccctggcccttcaaacagaag
gtgactctgatgctgatggaccagggctcctccaggaaacacctgggcgacgccttcaag
cctgatcccaacagcagcagcttcagacgtcccagcgcagagatgaacatcgcctccggc
tgtcctctgtttgtgtctcagagcgtcctggaggccggcagctacatcaaagatgacacc
atcttcatcaaggttaccgtggatacctctgaccttcctgacccgtga
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