Amphiprion ocellaris (clown anemonefish): 111576508
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Entry
111576508 CDS
T06018
Symbol
kdm2ab
Name
(RefSeq) lysine-specific demethylase 2A
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
111576508 (kdm2ab)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aoce03000
]
111576508 (kdm2ab)
04121 Ubiquitin system [BR:
aoce04121
]
111576508 (kdm2ab)
03036 Chromosome and associated proteins [BR:
aoce03036
]
111576508 (kdm2ab)
Enzymes [BR:
aoce01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
111576508 (kdm2ab)
Transcription factors [BR:
aoce03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
111576508 (kdm2ab)
Ubiquitin system [BR:
aoce04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
111576508 (kdm2ab)
Chromosome and associated proteins [BR:
aoce03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
111576508 (kdm2ab)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
111576508 (kdm2ab)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
JHD
JmjC
F-box
Cupin_8
LRR_6
LRR_8
Cupin_1
LRR_4
Motif
Other DBs
NCBI-GeneID:
111576508
NCBI-ProteinID:
XP_023137986
Ensembl:
ENSAOCG00000011098
LinkDB
All DBs
Position
13:complement(17798756..17813373)
Genome browser
AA seq
1306 aa
AA seq
DB search
MEDPHTRYSKRLRTGTRRRYQDDGISDDEIEGKRMFDLDEKLECGRFGSDLVKHMDGKDF
TFEYIQREGLRDPIIFETADGLGIQMPDPDFSVSDVKLFVGSRRIVDVMDVNTQKGIEMS
MAQWRRYYETPPSEREKLYNVISLEFSHTRLENLVKRPASVDLIDWVDNMWPRHLKERQR
DSTNAIIDMHYPKVQKYCLMSVQGCFTDFHIDFGGTSVWYHILRGGKVFWLIPPTPQNLE
MYENWVLSGKQGDIFLGDKCHDCQRIELKQGNTFIIPSGWIHAVYTPEDTLVFGGNFLHS
FNIPMQLNIYNIEDRTRVPAKFRYPFYYEMCWYVLERYLYCLTSVSHLTPEFQKYSLGIG
LTRADLETSEHTGNGTSNGFDSDTEIVEIEVKKEVVEEVKEEQTAEVIMPQHVLTPFELE
GLWNLIGKLEELPTHKKCVPAGIRNAAALLEDMRAVLKERASDNHKLAYTGEPIVSWPKR
PSWYQPPTPPPPVIYRPRLPPPLHKPLGQRPNKRSSISALRRRRVRCKRCAACCRKECGN
CQYCYDMRKFGGPGRMKKSCVMRQCLAPALPNTARCVICGEGESDESNPSTHSLMECSVC
SDITHRQCVKEPGEGKINQDLPSCWECPKCYQGKDSASESSSDEESEESESSTSLPQSKL
AYREGIGVADGTRRGRRSRSPGRPTAPPPSQKLLLQHQQNRKRASALELRLKKRIKLERS
KILTKQSSLGRSSRLLGSRMLSRLRSPTSRLPQSRGRGSTWASGAPYHNTPRGTGSFEQQ
QSSLGLVLEPKGEPRRGRGRGVRLRGGGAGRGIRGGRSHAELEEESEDSSSSSTNSSSSD
DEEEEESVQNSGRGGDKENQPQSRRGGQAAKERAEEGSEVANQNGAEEDEEEEMQQDSQA
GDKDGSYLKVTLQKPTRAKRDPSAIVPKLEAIAPQTATSTIHNQTRALVRPPIRNRGPCP
DQLSNRHTPPHTRSGHTDSRASHPERLDASKRTRLSRPAKLSNGASSSSTSELPHLRIPL
SALQEGGGEADRESIGSGPGCEREVWVSVFRYLSRADLCVCMAVCKNWYKWCLDKRLWAR
IDLSIKRTVTPQALTGIIKRQPVTLDLSWTNISKKQLNWLVGRLPGLKDLMLAGCSWSSI
SALCSSGCPLLRSLDLRYADGVKDSQIRDLVTPPGCDNRSQLRTMQCLRLAGLDISDSTL
RLVIRHMPHLTKLDLSHCNSLTDNSINLLTAVGSSTRNTLAELNLGGCSKLTDTCLKYLR
RLSCISLLDLRGCKGVSRKACEAFISELSVNTLYCLSDEKLIQRIS
NT seq
3921 nt
NT seq
+upstream
nt +downstream
nt
atggaggatcctcatacgcggtatagcaagcgcctgcgtacagggacgcggcgccgctac
caggatgatggaatttcagatgatgaaattgaagggaaacgaatgtttgacctggatgaa
aagttggaatgtgggaggtttggctctgacttagtcaaacatatggacggtaaagatttt
acttttgaatacatacagagggaagggctcagagaccccattatctttgagacagcggat
ggccttggcatacaaatgccagaccctgactttagtgtgagtgatgtcaagttgtttgtt
ggtagtcgacgcattgtagatgttatggatgtaaacacccagaagggaattgagatgtca
atggctcagtggcgacgctactatgagactccaccatcagaaagagaaaaactctacaat
gtcatcagcctggagttcagccacacaagactggagaatctggtcaaacgcccagcttcg
gtggatctcattgactgggtggacaacatgtggccccgccatctcaaagagagacagagg
gactccacgaatgccattatagatatgcattatcccaaagtacaaaagtactgtctcatg
agtgtgcaaggctgcttcacagatttccacattgactttggaggtacttccgtctggtac
cacattctgcgtggaggaaaggtgttctggctgattccacccacaccacaaaacctggag
atgtatgagaactgggttttatcaggaaaacagggagacatcttcttgggggacaagtgt
catgactgtcagaggatagagctcaagcagggaaacacctttataataccatcagggtgg
atccatgctgtgtacacgccggaggacacgctggtgtttggggggaatttccttcacagc
tttaacatccctatgcaactcaacatctacaacattgaggatcgcacacgggtgccagca
aagttccgctacccattttactatgagatgtgctggtatgtcctggagagatacctctac
tgtctgaccagtgtctcccacctcacccctgagttccagaaatactctcttggcataggg
ctgaccagggctgaccttgaaaccagtgagcacaccgggaatggcacctcaaatggattt
gacagtgacactgaaatcgtggagatcgaggtaaagaaggaagtagtcgaagaagtcaaa
gaagaacagacagctgaagttatcatgcctcagcatgtgctgaccccctttgagctggag
ggactatggaacctcatagggaagctggaggagctgccaacccacaaaaaatgtgtccct
gcaggcattaggaatgctgcagctctgcttgaggatatgagggctgttctgaaggagcgt
gccagtgacaaccacaagctagcctacactggagagcctattgtcagctggcctaaaagg
ccatcatggtaccagccacccaccccccccccacctgttatttaccgtcctcgcttgccc
ccccccctccacaagcctctgggtcagaggcccaacaaacgctcttccatctctgccttg
aggcgcagacgggtgaggtgcaagcgctgtgctgcctgctgcaggaaggagtgtggcaac
tgccaatactgctatgacatgaggaagtttggtgggcctggacgtatgaagaagagctgt
gtcatgagacagtgtctagcgcctgccttgccaaacacagcacgatgtgtaatatgtgga
gagggagaatcagatgaatctaatcccagcactcattccctcatggagtgctctgtctgt
tctgacataacccatcgtcagtgcgttaaggaacctggagaagggaagatcaatcaggac
ttgcccagctgctgggagtgtcctaaatgttaccaaggcaaagactcggcatcagagtct
tccagtgatgaggaaagtgaagagtcagagagctcgacctccttgccacagtccaaactt
gcataccgggaaggcatcggtgtggccgatggtacaagacgagggagacgtagcagatcc
ccaggcagacccacagcaccaccaccttcccaaaaactactactgcagcatcaacagaac
cgcaaaagagcaagtgcactggagctcagacttaaaaagaggataaaactggagcggagc
aaaatcttaacaaaacagtcttctctaggccgttcttccaggctgctgggctccaggatg
ctatcccggctgcgctctccaacgagcagactacctcagagcagaggccggggctccacc
tgggcaagtggtgctccttatcacaacactccaagagggactggatccttcgagcagcag
cagtcttcccttggtctggtacttgagcccaaaggagagcctcgcagagggaggggaaga
ggtgtgaggctgcgggggggaggagcaggaagaggcatcagaggcggtcgaagccatgca
gagttagaggaggagagtgaggacagcagcagcagcagcaccaacagcagcagcagtgac
gacgaggaggaagaggagagcgtgcagaacagcgggaggggaggggataaagagaaccag
ccacagtcgaggcggggaggacaagcagccaaagaaagagcggaagaagggagtgaggtg
gccaaccaaaatggtgcagaggaagatgaggaggaggagatgcagcaggacagtcaagca
ggggacaaagatggctcatatcttaaagtgacactccaaaagccaaccagagccaagcga
gacccatcagccattgttcccaaattagaggctatcgcccctcaaactgccacttccacg
atacacaaccagaccagagcccttgtcagaccccccattagaaatcgaggtccctgtcct
gatcaactttcaaataggcacacaccaccacacactcgcagtggacacactgactcccgc
gcttctcacccagaaagactcgatgcctctaaaagaacaagattgagcaggccggcgaaa
cttagcaatggcgcttcctcttcttcaacatctgagcttccccatctgcgcatccctctg
tctgccctgcaggaaggagggggtgaggcagacagggagagcatcgggagtggcccggga
tgtgagagggaggtgtgggtgtctgtcttccgttacctaagtagagcagatctctgcgtc
tgcatggctgtctgcaagaactggtacaaatggtgtttagacaagcggctttgggctcgg
attgacctgagcatcaagcgcactgttactcctcaggccctgacaggtatcataaagaga
cagccagtcacacttgacctctcctggaccaacatctccaaaaaacagctcaactggctt
gttggccgcctacctgggcttaaggatctgatgctggcaggttgctcctggtcgtctatt
tcagctctttgctcctctggttgccctctcctccgttctctagacctgcggtatgctgat
ggggtcaaagactctcaaatcagggatctagtcacccctccaggctgtgacaatcgcagc
caattgagaaccatgcagtgtttgcgactagcaggcctggacatcagtgactctactctc
cgtctggtcatccgtcatatgccccatttaacaaaactggatctctcccactgcaacagc
ctcaccgacaactccatcaacctgcttactgcagtgggctcgtccacccgaaacacactc
gcagaactcaacctgggaggttgcagtaagctaacagacacgtgtctgaagtatctccgc
cgtctctcttgcatctcgctgcttgatctgcgaggctgtaaaggcgtctcccgtaaggcc
tgtgaggccttcatctccgagctgtcagtcaacacgctctactgcctatcagatgaaaaa
ctgatccagcggatatcctaa
DBGET
integrated database retrieval system
