Amphiprion ocellaris (clown anemonefish): 111576782
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Entry
111576782 CDS
T06018
Name
(RefSeq) protocadherin gamma-C5-like isoform X3
KO
K16497
protocadherin gamma subfamily C
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
aoce04515
]
111576782
Cell adhesion molecules [BR:
aoce04515
]
Cadherins
Protocadherins
111576782
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_tail
Cadherin_FAT4_N
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
111576782
NCBI-ProteinID:
XP_023138418
Ensembl:
ENSAOCG00000021302
LinkDB
All DBs
Position
13:complement(18811973..19165895)
Genome browser
AA seq
993 aa
AA seq
DB search
MGMTPLTESGMTKRKGSRDWRWQALWWHNFFLLWSTIDAQTRYSITEELKQGSVVGNLAK
DLGLGLSDIFDRKLHVASEADEQYFSVDAGKGELVVNDRIDREALCGQSTSCVLPLQVVI
EDPLQLHRIEVEIRDINDNSPSFLSNELSLNIAESAAVGTRFPLESATDPDVGSNSLKSY
TISKNDCCSLKIKEIEGGKAVPELVLEKPLDRETKSVHKILLTALDGGNPVRSGTTQITI
SVLDINDNFPVFEKNVYKVSLGEKSLKGAVVIKPKATDADEGLNGEIEFSFGSRTPNSVL
SMFDINDLTGEITLKGELDYETAKSYDIDVTAKDKGSPQMEGHCRVQVDITDFNDNAPEI
VFTSQPKPIREDAPSGTVVALISARDLDSADNGKVTLQLANSSPFNLKPSFSNNYALVTS
GALDRETCSNYNIEITATDSGSPPLSSKKTIPVRITDVNDNPPIFTQPSYNVYLKENGVP
GSILFSVSASDLDFGDNAKISYSILDSKVQDVSVSSYVYINSDNGSIYSMHSFDYEKLKV
FQIQVQAKDQGSSSLSSNATVHVFILDQNDNAPAVIYPSSAALGSLSHQRMPRSAKAGHL
VTKVTAVDADSGHNAWISYKVSEATDASLFTVNLYTGEVRTKRAVSEQDDSSQRLLIEIK
DDGEPVQSATVTVSILLEDGLHEPILDLRHKSMVEPSKKTGRITLYLILSLASVSVLSLV
TFVILAVKCMRSSRSSGSCCMRRSDCDDYKNPNRNLQIQLNTDGPIKYVEVLGGDMLSQS
QSFRSCMSPMSEYSDFTLIKPSSTTDFKEVISVLDASLPDSTWTFESQQQKPPNNDWRFT
QGQRPGPSGPHMPYGTHIRWTPKSGTRATGGPEVAMGTGPWPQPPTEAEQLQALMAAANE
VSEATATLGPGTMGLSTRYSPQFTLQHVPDYRQNVYIPGSTATLTSNPQQQQATAQQATQ
QALPPPQASAQPEPPKAAQTPASKKKSTKKEKK
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
atgggaatgacgcctttaactgaatcagggatgacaaagagaaaaggatcccgagactgg
agatggcaggcgctttggtggcataatttctttctcttgtggagtacaatagacgcacag
actcgttacagcatcacagaggaactaaaacagggatcagtggtaggaaatttagccaaa
gatctgggtctgggactatcagatatttttgaccgtaaactgcacgtcgcctctgaggct
gatgagcagtatttcagtgtggatgcggggaagggcgagctggtggtgaatgacagaata
gacagagaggctttatgcggacaaagcaccagctgtgttctacctttgcaagtggttatt
gaggacccgttacagttacaccgaattgaggtagaaatacgagatattaatgacaattct
cctagttttctttcaaatgaattatctttaaatatagccgaatcagcagcagtgggaacg
cgctttcctttggagagcgcaacggaccccgacgttggaagcaattcactcaaatcatac
acaatcagtaaaaatgactgttgttcccttaagataaaagaaatagagggcggtaaggct
gttccagagctggttttagaaaagccacttgatcgagagacgaaatctgttcacaaaata
ttattaacagcattagatggaggaaatccagtaagatctggaaccacacaaataactata
agcgttcttgacataaatgacaattttccagtttttgaaaagaacgtttacaaagtatcc
ttgggtgaaaaaagtcttaaaggagctgttgttatcaagcccaaggcaacagacgcagat
gaaggtttaaatggcgaaattgaattctcatttggttctcggacaccaaattctgtgtta
tcaatgttcgatattaacgacttaacaggtgaaatcactctgaaaggagagttagactat
gaaactgctaagtcatatgacattgatgtgactgcaaaagataaaggtagtcctcaaatg
gaaggtcactgtcgtgtgcaggttgatattactgatttcaatgacaatgctcctgaaata
gttttcacttctcagccaaaaccaatacgtgaggacgcaccaagtggcaccgtagtggca
ttgatcagtgcacgagatcttgattctgctgataatggcaaagtaacgttacaactcgcc
aacagctctccttttaatctgaaaccttctttttctaataattacgcactggtcaccagc
ggtgctttagacagagagacctgctccaactataatattgaaataacagccactgattca
ggctctcctcctctgtccagtaagaaaactatacctgtcagaatcactgatgtaaatgac
aatcctcctatatttactcagccttcatataatgtttatttgaaagagaacggagtacca
ggttctatactgttctcagtatcagcctctgatctggattttggtgacaacgcgaagatc
tcttactctattctggactctaaagtgcaggacgtttctgtctcgtcttatgtttacatc
aactcagataacggcagcatctacagcatgcactcgtttgactatgagaagctgaaggtg
tttcagattcaggttcaggcaaaggatcagggctcttcgtctctcagcagcaacgccacg
gtccatgttttcatcctggaccagaacgacaatgcccccgctgttatttacccctcctcc
gctgccctgggctccctctctcatcagaggatgccccgctcggccaaagcgggtcacctg
gttaccaaggtgacggctgtggacgctgactcgggccacaacgcgtggatctcgtacaaa
gtgtcggaggccacagacgcgtctctgttcactgtcaatctgtacacaggtgaggtgagg
actaaacgcgctgtgtccgagcaggacgactcctctcagaggctgctgatagagatcaag
gacgacggggagccggtccagtccgccaccgtcacggtgtccatcctgctggaggacggt
ctccatgagcccatcttagacctgagacacaaatcgatggtggagccgagcaagaaaact
gggagaatcaccctgtatttgattctgtctctggcctcggtgtccgttctgtctctggtg
acttttgtcatcttggcggtgaaatgcatgaggagcagcaggagcagcggtagttgctgc
atgagacgcagcgactgtgatgattacaagaacccgaacaggaacctgcagattcagctg
aacactgatggacctataaagtacgtggaggtcctgggaggagacatgttgtctcagagt
cagtcgttcaggtcgtgtatgtctccgatgtcagagtacagtgatttcactttgattaag
cccagcagcaccacagactttaaggaggtgatcagtgtcctggatgcgtctttaccggac
agcacctggacctttgagagccagcagcaaaagccccccaacaatgactggcgctttaca
cagggacagagacctggacctagcggtccccacatgccatacggtacacacatacgatgg
acgccgaagagtgggacaagggcaactggaggacctgaggttgctatgggaaccggcccc
tggccccagccccctaccgaagctgagcagctccaggccctcatggctgcagctaacgaa
gtgagcgaggctacggccaccctcgggcctggcaccatgggcctgagcacccgctacagc
cctcagttcaccctgcagcatgtacctgactatcgccagaacgtctacatccctggcagc
acggccaccctcacctccaacccccagcagcagcaggccacggcccagcaggccacccag
caggcgctgcccccacctcaggcctcggcccagcccgagcccccaaaggccgcccagacc
cctgcttccaagaagaagtccaccaagaaggagaaaaagtag
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