KEGG T06018: 111577430

Amphiprion ocellaris (clown anemonefish): 111577430

Entry

111577430         CDS       T06018

Symbol

cxcl12a

Name

(RefSeq) chemokine (C-X-C motif) ligand 12a (stromal cell-derived factor 1)

K10031

C-X-C motif chemokine 12

Organism

aoce Amphiprion ocellaris (clown anemonefish)

Pathway

aoce04060

Cytokine-cytokine receptor interaction

aoce04672

Intestinal immune network for IgA production

aoce04810

Regulation of actin cytoskeleton

Brite

KEGG Orthology (KO) [BR:aoce00001]
09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    111577430 (cxcl12a)
09140 Cellular Processes
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    111577430 (cxcl12a)
09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    111577430 (cxcl12a)
09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:aoce04052]
    111577430 (cxcl12a)
   00536 Glycosaminoglycan binding proteins [BR:aoce00536]
    111577430 (cxcl12a)
Cytokines and neuropeptides [BR:aoce04052]
Cytokines
  Chemokines
   111577430 (cxcl12a)
Glycosaminoglycan binding proteins [BR:aoce00536]
Heparan sulfate / Heparin
  Chemokines
   111577430 (cxcl12a)

SSDB

Motif

Pfam:

IL8

Other DBs

NCBI-GeneID:

NCBI-ProteinID:

Ensembl:

UniProt:

LinkDB

Position

16:complement(12200489..12206307)

AA seq 98 aa
MDAKLLAAVAALMVLIFVSPSQAKPISLVERCYCRSTVNSVPRGYIRELRFIHTPNCPFQ
VIAKLKTNKEVCLNPEIRWMQQYLKNAINKMKKSKQGN

NT seq 297 nt +upstreamnt +downstreamnt
atggatgcgaagcttctggcagccgtggctgcgctcatggtgttgatatttgtgtctcca
tcacaagcaaagcccatcagcttggtggagagatgctactgtcgctcaacggtcaacagc
gtcccacgaggctacatccgagagctccggttcatccacacacctaactgccccttccaa
gtgattgccaagctgaagaccaacaaggaggtgtgtttgaacccagagatccgatggatg
caacagtacctgaagaacgccatcaacaagatgaagaaatccaaacagggtaactaa

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