KEGG   Amphiprion ocellaris (clown anemonefish): 111577927
Entry
111577927         CDS       T06018                                 
Name
(RefSeq) rano class II histocompatibility antigen, A beta chain-like isoform X1
  KO
K06752  MHC class II antigen
Organism
aoce  Amphiprion ocellaris (clown anemonefish)
Pathway
aoce04145  Phagosome
aoce04514  Cell adhesion molecules
aoce04672  Intestinal immune network for IgA production
aoce05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:aoce00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    111577927
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    111577927
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    111577927
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    111577927
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:aoce04147]
    111577927
Exosome [BR:aoce04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   111577927
  Exosomal proteins of epithelial cells
   111577927
  Exosomal proteins of breast milk
   111577927
SSDB
Motif
Pfam: C1-set MHC_II_beta Ig_3 C2-set_2 Ig_2 I-set ig Psg1 C2-set_3 DUF202 Scaffolding_pro Phage_holin_10
Other DBs
NCBI-GeneID: 111577927
NCBI-ProteinID: XP_023140223
Ensembl: ENSAOCG00000001493
LinkDB
Position
9:13919108..13935403
AA seq 306 aa
MELGVPNTLICFVNDFHPPVVDITWTKKGQLVDQSEISQTQLLQQRLQLPHHVLPELHIY
SCSVHHISLQIPLTRFWGGYVYQMISDCEYGDNITDTVYFVKNIFNQKLNNIYDSRLGKY
IGFGELGMKNAAHYNNQSWKMQARKVEVDTLRRYNVRLFRKSILDRKVPPNVKVHQTKPA
DYGERSMLVCSVWGFYPQEVRVSWLRDGEEVTTDVFSSDVLANGDWSFQFHTYLELTLKR
GERVTCRVDHSSLQESLEVEWDTFALDVKHATIAVGIVFFFAGLAVAAVGALYYWWKKQR
FHANRL
NT seq 921 nt   +upstreamnt  +downstreamnt
atggagctcggggtgcccaacactctcatctgcttcgtcaacgacttccacccacctgtt
gtcgacatcacctggaccaagaaaggacagctggtggaccagagcgagatcagtcagacc
cagttactccaacagcgacttcagcttccgcaccacgtcctacctgaacttcacatctac
agctgcagcgtgcaccacatcagcctgcagatccctctcaccagattctggggtggctac
gtgtaccagatgataagtgactgcgagtatggtgacaacatcacagacacggtctacttt
gtgaaaaacatatttaaccagaagcttaataacatatacgactctcgacttgggaagtac
atcggctttggagaattaggcatgaaaaatgcggctcattataacaaccagagttggaaa
atgcaggcaagaaaggtggaagtggacactcttcgcagatacaatgtaagattgttcaga
aagagcatactggatagaaaagtgcctccaaatgtcaaggtccatcagaccaagccggct
gactacggggagcggtccatgctggtgtgcagtgtttgggggttttatcctcaggaagtg
agggtgagctggctgagagacggagaggaagtcaccactgacgtcttttcttcggatgtt
ctggccaatggcgactggagcttccagtttcacacatacctggagctgacccttaagaga
ggggagagggtgacctgcagggtggaccacagcagcctacaggagagcctggaggtggag
tgggacaccttcgctctggatgttaaacatgcgacgattgcggtggggattgtattcttc
tttgccggcctcgctgtagctgctgttggagctctttactactggtggaagaaacagagg
tttcacgccaaccgactgtga

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