Amphiprion ocellaris (clown anemonefish): 111578106
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Entry
111578106 CDS
T06018
Symbol
nr1i2
Name
(RefSeq) nuclear receptor subfamily 1 group I member 2
KO
K08540
pregnane X receptor
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aoce03000
]
111578106 (nr1i2)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
aoce03310
]
111578106 (nr1i2)
Transcription factors [BR:
aoce03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
111578106 (nr1i2)
Nuclear receptors [BR:
aoce03310
]
1. Thyroid hormone like
1I. Vitamin D3 like receptor
111578106 (nr1i2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
DUF5702
Motif
Other DBs
NCBI-GeneID:
111578106
NCBI-ProteinID:
XP_023140475
Ensembl:
ENSAOCG00000010669
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All DBs
Position
11:6399441..6407891
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AA seq
439 aa
AA seq
DB search
MSKTTGDGVQLICEMFTMQNEEDEEGKVTEDEEPRACGVCGDRAKGYHFNALTCEGCKGF
FRRATQRSSKLRCPLFSRCVITKDTRRSCQACRFRKCQAIGMRTEMVMSEKEVLERRIRI
KKKKMHNVSTQLSSQQETVIQELLSSHRSTFDSGFSRSSGCRPMDRNILSGSEYKQSASE
PFHLLTSCPTNTCTTASKSAADPTASSSASSLFSSHCGYLETQENHKEDEVKNTCVFTAL
PHLADVTTYMIQDIISFSKSLKDFRSLPIGDQISLLKGAMFEIMQIRFNMVFNSRTSNWE
CGRITYCIDDAVRAGFQPLLLEPVFKFHHTLRQLDLQEEEYVLMQAMSLFSPDRPGVQQH
SVIDKVHENLALTLKTYIDCKRTGPKKHLLYPKVIACFTEMRTMTEEYSKQILQIQDIQP
DTISPLIMEVVSKDTCDGF
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagacaacgggggacggggtgcagctcatctgcgaaatgttcacaatgcaaaat
gaagaggatgaggagggaaaggtgacggaagacgaagagcccagagcctgtggtgtgtgt
ggagatcgggcgaagggttaccacttcaatgctttgacgtgtgaaggctgcaagggcttc
ttcagacgtgccacacagagatcatccaagctccgctgtccattgttcagtagatgcgtt
ataacgaaggacacccgccgatcatgtcaagcctgccgcttccggaaatgccaagccatt
ggcatgcgtacagagatggtcatgtctgagaaagaggtactggagaggagaatccgaatc
aagaagaaaaagatgcataatgtatcaacgcagctttcatctcaacaagaaacagtcatc
caggagctcctctccagccaccgcagcacatttgactcaggattttcccgctccagtggc
tgcaggcctatggacagaaacatcctctctgggagtgaatacaagcagtctgccagtgag
ccctttcacctactgaccagctgccctacaaacacctgcactacagctagtaaatctgca
gctgaccccacagcatcttcatcagcctcctccctcttctccagccactgtggttattta
gaaacacaagagaaccacaaggaagatgaggtgaaaaacacctgtgttttcactgctctt
ccacatctggctgacgtcacaacatacatgatccaggacatcattagtttttccaaaagt
ctgaaggacttccggtctctacctataggggaccaaatatctctgctgaagggagccatg
tttgaaataatgcagatccgctttaacatggtgttcaactcgagaacgagcaactgggaa
tgtggacgtattacatactgcatagatgatgccgtacgagcgggtttccagccactcctg
ctggagcctgtgttcaaatttcaccacacgctgcgccaactggacctgcaggaggaagag
tacgttcttatgcaagccatgtccctgttttctccagatcgtccaggtgtacagcagcac
agtgtgatcgataaggtccatgaaaacttggcgctgacgttaaaaacctacatcgactgc
aagaggacaggccctaaaaagcacttgctgtatcccaaagtgatcgcctgctttacagag
atgaggacgatgactgaggagtacagcaaacagattctgcagatccaggacatccagcct
gacactatttctcccctcataatggaggtggtcagtaaagacacgtgcgatggcttctga
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