KEGG   Amphiprion ocellaris (clown anemonefish): 111578144
Entry
111578144         CDS       T06018                                 
Symbol
apaf1
Name
(RefSeq) apoptotic protease-activating factor 1
  KO
K02084  apoptotic protease-activating factor
Organism
aoce  Amphiprion ocellaris (clown anemonefish)
Pathway
aoce04115  p53 signaling pathway
aoce04210  Apoptosis
aoce05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:aoce00001]
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    111578144 (apaf1)
   04115 p53 signaling pathway
    111578144 (apaf1)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    111578144 (apaf1)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz WDR55 APAF1_C Beta-prop_EML_2 NB-ARC WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd EIF3I Beta-prop_CAF1B_HIR1 APAF-1-like_WHD Beta-prop_WDR90_POC16_2nd Beta-prop_EML ANAPC4_WD40 Beta-prop_IFT122_1st CARD Beta-prop_WDR75_1st WDR90_beta-prop_4th NBCH_WD40 Beta-prop_RIG_2nd WD40_MABP1-WDR62_1st Beta-prop_IFT140_1st Beta-prop_WDR19_1st Beta-prop_WDR35_TULP_N Beta-prop_EIPR1 Beta-prop_HPS5 RMC1_N eIF2A Ge1_WD40 Beta-prop_NUP159_NUP214 Beta-prop_NWD2_C WD40_like CARD_2 WD40_RFWD3 Beta-prop_SPT8 AAA_16 AAA_22 Dark_WHD nSTAND1
Other DBs
NCBI-GeneID: 111578144
NCBI-ProteinID: XP_023140528
Ensembl: ENSAOCG00000009836
LinkDB
Position
21:complement(13177956..13232368)
AA seq 1258 aa
MALEERARSCLLRFRHRLEQDIKPSYLMDHMISDGVMTVDEEEKIRTKPTRKDQSAALLE
LLLMKDNRAYISFYNSLIKESYDDLAHLLREDLPSIFCEAHKSSSDSATSYVQTVLSEGG
VPQRPVVFVSRPELVNRVREKLYWLQKDPGWVTVFGMAGSGKSVLTAEAVRHHGLIEDCF
PGGIHWLAIGQLDKPDLLVKMQSLCFRLEQSLDSQTLSRPPNSLDEAKERLRFLMLRRYP
RSLLILDDIWDSTVLKAFDIHCRILLTTRNRSLTDSVSGAKYEVGVQSGLDENKGLEILA
LYTKMKPHGLPEEARSIVRECKGSPLVVSLIGALLKDNPNRWCYYLRQLQQKQFKRIRKS
SSYDYDALDQAMAASIEVLPDEHRELYKDLTVLEKDIKIPAKVLSVLWDLEPEEVEDILQ
EFVDKSLLFVDSHHKPYLYYLHDLQLDFLVEQNRTQLESLHSKVVRQYQQHYRDGPPTSG
DEECLYWIRFLTYHMAKANLSQELYSLMFSLDWVSTKSQIMGPAHLINDYVEYGSILDKE
NSEVRSQFQEFLSQNGHQLEERPFPDVVQLALSQPHNSEVYRQARLQAQDRTSTGKLYFD
LVNKSGVENLSRLVIHPHQGSIYSACFSHDGTKIASCGASKTLKVFKSTSGEKLTEIQAH
DDEVLCCAFSPDDHLLATCSTDRKIKVWHTERAMLLRVFEEEHEEQINHCQFTNTTKRLL
LATCSNDDCMNVKLWNLNKPSSQNTMFGHFAPVSHCCFSPDDSYLSTSSNDGTIKLFQVS
SANEWKTINVRDLVAENDEEVLVKCSTWTGDGKLVICAVRNAVLVFDVETSEMLLEIRTS
RLSTVQYCDACPTTNLLAIAFSNYTLELWDLEANKKMADCSGHLSWVQRVQFSPDGSQLL
SCSDDQTVRLWETNKVHTSSAICLKRDSNVLFNGEEIVVSAADNCNRLQVRDGRTGSVLF
QSEEKSSRIRCTCMCRQPSAVVLGQEDGTVQVLELPSGKLLANLLGHTKTVLHCQFSQNG
QTLITSSEDTTIRVWRWQSGECKVLQGHKEQVRCFSLLSNSPNESRLLSWSFDGTVKVWD
TETGEKLQDIEAHRGTILGCHVSPDGCLFATTSADKTAKLWHCESWQCAYTLNGHQDCVR
SCRFSWDSQRLATGDDNGEIRLWSVKDGSLLKICCPDSKDGMDSLHGGWVTDLHFSPDNS
LLVSTGGYIKWWNVEKGEALQTFYPTGSALKKVHVSSDFSTFVTIDNIGILYILQRVA
NT seq 3777 nt   +upstreamnt  +downstreamnt
atggcgctggaggaaagagcacggagctgtctgctgcgctttcgccacagactggagcag
gacatcaagccttcatacctgatggaccacatgatcagtgatggtgtgatgactgtggat
gaggaggagaagatcaggactaagcccaccagaaaggatcagtctgcagccctgctggag
cttttgttgatgaaagacaatcgtgcgtacatctctttctacaactccctgatcaaggaa
tcatatgatgatttggcacatctgctccgtgaagacctaccaagcatcttttgtgaagca
cataagagctcctccgatagcgctacatcttatgtccagacggtgcttagtgaaggcggc
gtgccacagaggccggttgtgtttgtcagcagaccagagctggtgaaccgggtcagagag
aaactttactggctccagaaggaccctggctgggtcactgtcttcggcatggctggttcg
ggcaaatctgtcctcactgctgaggctgtccgacaccacggactcatcgaagactgtttt
cctggaggtatccactggctggccatcggtcaactggacaaaccagacctgctagtgaaa
atgcagtcattgtgttttcgcctggagcagagcctggattcccagaccctctccagaccc
cccaactctctggatgaagccaaggaacgtctgcgcttcctcatgctgcgcagatatccc
agatctctgctgattttggatgacatctgggatagtacagtgctgaaggcatttgatatc
cattgtcggattcttctaaccaccagaaatagaagcctgactgactctgttagcggtgct
aaatatgaggtgggagtgcaaagtggtctggatgaaaacaaggggctggagattcttgct
ctgtacactaaaatgaagcctcatggactacctgaggaggctcgcagcatcgtcagagaa
tgtaaaggctcccctctggtggtgtctctgattggggctttgctcaaagacaaccccaac
cgttggtgctactacctccgccagctgcagcagaaacagttcaagcgcattcgcaagtct
tcatcttacgactacgatgctctggatcaggcgatggctgctagtattgaggtcctaccc
gatgagcatcgagaactctacaaggacttaaccgtgctggagaaggacatcaaaatccct
gctaaggtgctgtctgttctgtgggatctggagccagaggaggtggaggacattctccag
gagtttgtggacaagtctctgctttttgtggacagtcaccataaaccctatctgtactac
cttcatgacctccagctagacttcctggtggagcagaatcgaacccagctcgagagcctt
cacagtaaggtggtgcgtcagtatcagcagcactacagagatggtcctcctacctccgga
gatgaagaatgtctctactggatcagatttttgacctaccacatggccaaagccaacctc
tcacaggagctctattccctcatgttctctctggactgggtcagcaccaaatcccagata
atgggtccagctcacctcatcaatgactatgtggagtatggatccattctggacaaagag
aacagtgaagtgcgaagtcagttccaggagtttctgtctcagaacggccaccagctggag
gagcgtcctttccctgatgttgtgcagctcgctctgtctcagccacacaactctgaggtt
taccgacaagctcggcttcaggctcaggaccgaaccagcactgggaaactctactttgac
ctcgtgaataagagtggtgtagagaatctgtcccgtttggtgatccacccccaccagggc
tccatctactctgcctgcttctctcatgatggaaccaaaattgcctcttgtggagcaagc
aagacactcaaggtttttaaaagtacctcgggtgagaagctcactgagatccaggcccac
gatgacgaagtgctttgttgtgccttctcccctgatgaccatctcctagcaacctgctca
actgacaggaaaatcaaggtgtggcacacagagcgagccatgctgctgagagtgtttgag
gaggagcatgaggagcagatcaaccactgtcagttcaccaacacaacaaagcgcctcctg
ctggccacctgctccaatgacgactgcatgaatgttaagttgtggaacctcaacaagcct
tcctcccagaacaccatgttcggccactttgcgcccgtcagccactgctgtttctccccc
gatgacagttatttgtccacttcctccaatgatggtaccattaagctttttcaggtgtcg
tctgccaatgagtggaagacgatcaatgtgagggacttggttgcagagaacgatgaagaa
gtcctcgtcaagtgcagcacctggaccggagatgggaagcttgtcatatgcgctgttaga
aatgctgttttggtatttgatgtggagacgtcagaaatgttgttggagatcaggactagt
cgtctgagcacagtgcagtactgtgacgcctgtcctactactaacctgctggccattgca
ttttcaaattataccctggagctgtgggaccttgaggccaataagaagatggctgactgc
agtggtcacctgagttgggttcaacgtgtccagttttctcccgacgggtcgcagctgctc
tcctgctctgatgaccaaaccgtgaggctatgggagactaataaggttcacacgtcctct
gcaatctgcctgaagagagattctaacgttctgttcaatggtgaagagatcgtagtgtca
gctgcagacaactgcaacagactgcaggtgcgtgatggcagaacgggatcagtgctgttc
cagtcagaggagaagtcatccaggataagatgtacctgtatgtgcaggcagccctcagct
gtggtcctgggccaagaggacggcactgtgcaggtgttggagctgccctctgggaagctt
ctggcgaatctgttgggacacactaagactgtgctgcactgtcagttcagccagaacggc
caaacactcatcacatcctctgaggacaccaccatacgggtgtggagatggcaatcaggt
gagtgtaaagtacttcagggtcacaaggagcaagtcagatgcttctctctcctctccaac
tcacccaatgaatccagactgctgtcctggtcctttgacggtactgtgaaggtgtgggac
acagagaccggagaaaaactgcaggacatcgaggctcatcgaggaactatcctgggctgt
catgtctcgccagacggatgcctctttgccaccacctctgctgacaagactgctaagttg
tggcactgtgagtcctggcagtgtgcttacacattgaatggtcaccaagactgtgtccga
agctgcagattctcgtgggacagccaacgcctcgcaacaggagatgacaacggagagatc
cggctctggagcgttaaggatggctctttattgaagatttgttgcccggatagtaaggac
ggcatggactctctccacggaggctgggtgactgacctgcacttctctcctgacaactct
cttctggtctcgactgggggctacatcaagtggtggaatgtggaaaaaggagaagccctg
cagaccttctatccaacaggaagcgctttgaagaaggtccacgtgtcatcggacttctcc
acctttgttaccatcgacaatatcggcatcctctacatcctccagagggtggcgtga

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