Amphiprion ocellaris (clown anemonefish): 111580332
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Entry
111580332 CDS
T06018
Symbol
iars1
Name
(RefSeq) LOW QUALITY PROTEIN: isoleucine--tRNA ligase, cytoplasmic
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
111580332 (iars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
aoce01007
]
111580332 (iars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aoce03016
]
111580332 (iars1)
Enzymes [BR:
aoce01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
111580332 (iars1)
Amino acid related enzymes [BR:
aoce01007
]
Aminoacyl-tRNA synthetase
Class I (U)
111580332 (iars1)
Transfer RNA biogenesis [BR:
aoce03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
111580332 (iars1)
Prokaryotic type
Other AARSs
111580332 (iars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Ubiquitin_IARS1
Anticodon_1
DUF5915
tRNA-synt_1g
tRNA-synt_1e
Plectin_PPL
PriX
Motif
Other DBs
NCBI-GeneID:
111580332
NCBI-ProteinID:
XP_054866468
Ensembl:
ENSAOCG00000006976
LinkDB
All DBs
Position
5:33756810..33819113
Genome browser
AA seq
1268 aa
AA seq
DB search
MVEPVPESISFPSEEETILKLWQEKDCFQECLKQSKNRPRYTFYDGPPFATGLPHYGHIL
AGTIKDIVTRFAHQSGFHVDRRFGWDCHGLPVEYEIDKTLGIKGPEDVAKMGIAEYNKQC
RNIVMRYSNEWETSVMRMGRWIDFKSDYKTLYPWFMETVWWVFKQLYDKGLVYRGVKVMP
FSTACNTPLSNFESHQNYKDVQDPSVIVNFPLVESEDVSLIAWTTTPWTLPSNLALCVNP
EFLYVKVKDNTTDKTYIMMEARLGALFKSESEYTLLDKFPGKMLKGKKYKPLFTYFAKCE
EKGAFQVVMDNYVKEEEGTGVVHQAPYFGADDYRVCTEYNIIQRDQVPICPVDASGCFTS
EVTDFAGQYVKDADKNIIKWLKEKGRLVNASSFKHSYPFCWRSDTPLIYKAVPSWFVRVE
HMVEKLLDNNAKCYWVPEFVREKRFGNWLRDARDWAISRNRYWGTPIPLWVSDDFEEVVC
VGSVAELEELTGVKVTDLHRESIDSLTIPSRCGKGSLRRITEVFDCWFESGSMPYAQVHY
PFENRKEFEDTFPADFIAEGIDQTRGWFYTLLVLSTALFGKPPFKNVIVNGLVLASDGQK
MSKRKKNYPDPGLIVQSYGADALRLYLINSPVVRAENLRFKEEGVRDVLKDVFLPWYNAY
RFLVQNVQRLQKEDEIQFLYNESTAKQSDNIMDKWIQSFTQSLIQFFKAEMDAYRLYTVV
PRLVKFVDMLTNWYVRTNRRRLKGESGTEDCLWALETLFSVLFSMCRLMAPFTPFITEMM
YQNLRHLIDPASVEEKDSGSIHYLMLPQVRETLIDKRIESAVSQMQSVIELGRVIRDRKT
LPVKYPLKEVVVIHQDAEALKDIQSLQKYILEELNVRQLTLSTDKDKYGIRLRAEPDHMV
LGKRLKGAFKAVTASIKELSSEKLEAFQKTGSITVDGHELHEEDLRLMYTFDQSSGSAAQ
YEAHSDAQVLVLLDVTPDQSMVDEGVAREVINRIQKLRKKGHLVPSDEITVYYRCKPEGE
YLDSVIQAHTDFILATTKAPLLPFPVPKTASVIIEETTQLKGSDLELTIVKGSSAPRAPL
NGPACTYVNLRVKVDNKEQEGVVLLENPKGDNRLDLDKLKKVCSSIFGTNNTQLRVFNGG
TELTSKTDLQTLSSKTLSVTSSSSSAGPVQTTDTLLCPYVNLLLCNAQPAECQAGEVATL
LLDNPMGQNGLSYSGLLSEAAKVFGLRGRRLKLYQDQDLTQELPPDSSVKSLNTKTVFVR
VLPTTAEA
NT seq
3807 nt
NT seq
+upstream
nt +downstream
nt
atggtggagccggtccccgagtccatcagctttccctccgaggaggagacaatcctgaag
ttgtggcaggaaaaggactgcttccaggaatgcctcaaacaatccaagaaccgaccaagg
tacaccttctatgatggccctccttttgctacgggtctaccccactatggtcacatcctg
gctggcaccatcaaggacatcgttactcgctttgcccaccagagtggcttccatgtggac
cgacgctttggctgggactgtcatggcctgcctgtggagtatgagattgataagactttg
gggatcaaagggccagaagatgtggccaagatgggcattgcggagtacaacaagcagtgc
cggaacattgtcatgagatactccaacgagtgggagacttcagtgatgcgaatgggcagg
tggattgacttcaagagtgactacaagactctttacccatggttcatggagactgtttgg
tgggtgttcaaacagttgtatgacaagggtctggtgtaccgtggtgttaaagtcatgccc
ttctccactgcctgcaacacccccctctccaacttcgagtcccatcagaactacaaggat
gttcaggatccctcagtgattgtcaacttcccattggttgagagtgaggatgtttctttg
attgcctggacaaccacgccctggactctgccaagcaacctggccctctgtgtcaaccca
gagttcctgtatgtcaaggtcaaagataacaccacagacaagacctacatcatgatggag
gccagactgggagctctgttcaagtcggagagcgagtacactctcctggacaaatttcct
ggcaagatgctgaaagggaaaaaatacaagcctcttttcacgtactttgccaagtgcgag
gagaaaggagccttccaagtggtgatggataactacgtcaaggaggaagagggcacagga
gttgtccaccaggcaccttactttggagctgatgattacagggtgtgcactgaatacaac
atcatccagagggaccaggttcctatctgccctgtggatgcctcgggctgcttcacttca
gaggtcactgactttgcgggacagtatgtcaaagatgctgacaagaatatcatcaagtgg
ctgaaagagaaaggccgcctcgtcaatgccagcagtttcaaacacagttatcctttctgc
tggaggtctgacacgcccctgatctacaaagctgtccccagctggtttgtccgcgtggag
cacatggtagagaaactcctggacaacaacgcaaaatgttactgggttccagagtttgtg
cgagagaagcgtttcgggaactggctgagagacgcacgtgactgggcgatttcaaggaat
cgctactggggcacaccgatccctctctgggttagcgatgactttgaggaggtggtgtgt
gtagggtcagtggccgaactggaggagctgaccggagtcaaagtaactgatctgcatcga
gaaagcatcgacagtctgacaatcccgtcgcgctgtggaaagggctcgctgcggaggatc
accgaggtgtttgactgctggtttgaaagtggcagcatgccgtatgcccaggttcactac
ccctttgaaaacaggaaggagtttgaggacactttccctgcagacttcatcgctgaaggc
attgaccagaccagaggatggttctacacccttttggtgctctccacagcgctatttggc
aaaccgcccttcaagaatgtcattgttaacggactggtgcttgcaagcgatggacagaag
atgagcaagcgcaagaagaactacccagatccaggactgatagtgcagagctatggagcc
gatgccctcaggctgtacctcatcaactctcctgtagtaagagcagaaaatctgcgtttc
aaagaggagggtgtacgagacgtgttgaaggatgtcttcctgccgtggtataacgcctat
cgcttcctggtgcagaatgtgcagaggttacagaaggaggatgagattcagttcctgtac
aatgaaagcacagcaaagcagagtgacaacatcatggacaaatggattcagtctttcacc
cagtccctcatccagttcttcaaggctgagatggacgcttaccgcctgtacaccgttgtg
cctcgtctggtaaagtttgtggacatgctcaccaactggtacgtcaggaccaacagacgc
cgcctgaagggagagagtggcactgaggactgcctgtgggcgctggaaaccctcttcagt
gttctgttctccatgtgcaggctgatggctcccttcacacccttcattacagagatgatg
taccaaaatctgcgccacctcattgaccctgcttctgttgaagagaaggactctggcagc
atccactatctcatgctgcctcaagtcagggagactttgattgacaagcgtattgagagc
gctgtctcccagatgcagtctgtgattgagctgggcagagtgatccgagacaggaagacc
ttacctgtcaagtatccactgaaggaggtggtagttattcaccaggatgcagaggctctg
aaagacatccagtccctgcagaaatacatcctggaagagcttaatgtgcgacagttgaca
ctttcaacagacaaggacaagtacggtatccgcctgagagctgagccagaccacatggtg
ctgggcaagagactaaagggggccttcaaagccgtcactgcttctatcaaggagctcagc
agcgaaaagctagaggccttccagaagacaggatccatcacggtggacggccatgagctt
catgaagaggacctgaggttgatgtacacctttgatcagagctctggctcagctgctcag
tatgaagcacactctgacgcacaggtcctggtgctgctggatgtcaccccagaccagtcc
atggtggatgaaggcgttgccagagaggtcatcaaccgcattcaaaaactacgtaagaag
gggcatttggtgccatcagatgagataacagtgtactaccgctgtaagccagagggggag
tacttggactctgtgatccaggctcacactgactttatcctggctaccaccaaggctcca
cttctgcccttccctgtcccaaagactgccagcgttatcatagaggaaacaactcagctg
aagggctcagatttggagttaaccatagtaaagggatcatcagcccctcgagctcctcta
aatggaccagcttgcacatatgtcaacctcagggtgaaggtcgacaacaaagaacaagag
ggcgttgtactgttggaaaatcccaaaggggataacagactagacttggacaagctgaag
aaagtgtgcagcagcatctttggaaccaacaacacccagctcagagtcttcaatggtgga
actgagttgaccagcaaaacggaccttcagactctgagtagtaaaactttgtcagtgact
tcaagctcatcctccgctggccccgtccaaaccaccgacaccctcctgtgtccttacgta
aacttgttgctctgcaacgcgcagccagctgagtgccaggcaggagaggtggccaccctt
ttgctggacaacccaatgggccagaatggactcagctactcgggtctactgtctgaggct
gccaaggttttcggcctccgtggcagacggctcaaactctaccaggaccaggacctaact
caggagttgccacctgattcatctgtaaagtctctcaacaccaaaactgtgtttgtgaga
gttcttcctaccaccgctgaagcataa
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integrated database retrieval system
