Amphiprion ocellaris (clown anemonefish): 111586291
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Entry
111586291 CDS
T06018
Symbol
smg6
Name
(RefSeq) telomerase-binding protein EST1A
KO
K11124
protein SMG6 [EC:3.1.-.-]
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111586291 (smg6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aoce03019
]
111586291 (smg6)
03032 DNA replication proteins [BR:
aoce03032
]
111586291 (smg6)
Messenger RNA biogenesis [BR:
aoce03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
111586291 (smg6)
mRNA cycle factors
Common to processing body (P body) and stress granule
111586291 (smg6)
DNA replication proteins [BR:
aoce03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
111586291 (smg6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EST1_DNA_bind
PIN_4
EST1
DUF1455
Motif
Other DBs
NCBI-GeneID:
111586291
NCBI-ProteinID:
XP_023151765
Ensembl:
ENSAOCG00000002630
LinkDB
All DBs
Position
14:complement(9777519..9794814)
Genome browser
AA seq
1647 aa
AA seq
DB search
MANELDRVRISAAELRAEASNSVNITDCQKEEQREHHIHKQHRRREGKRPDLQRYQPVAG
HGRRHRDSEEGDAGPKDPLAADSHEHNQPLQSVKKGVYESETQDCTEGAPATNKREEDRM
RGDGSNTQNCRKGSFSQAKMDSNDEKGFVENDGEHQEPAGAAKPTRKARKPDREFYQPGS
RRNIQGKDCGVGREQDKPPPRKPEQKAELESPLSTGGEVNQKKPMQKQGRKEVNRRQESQ
DVETPPLPVDTSVEKITSKVEKINIKEKGKVGGPAQDAGELSCKGGEANDKERRGQGAGS
KDGDEKAEKKRERGNRRRRGVDKEKEKNQDSRREDEPGSGGKTAQDKVEKESDKKAPEAD
GEKTDKAGETHQSKRKENHRENRRGENNNSRSRDADKDPKTERNVDRTVERGDRNRYNAN
VTTPTSKRYSKSDIRRSRNRTYSSSSASSVTSLDGPGVGKDVEGRKWLHSEPRHSNKQQV
VNSGEGRRSHLKSWTTNEESSTESQEASEMSDRAEDQRRRRRGGEEERHREETNRPKGNK
GGGGRGILRVSLDKQSGTSSHSGETQHRKQGVVPRGRGGGILVLPARTDTSNSPEVGQRL
LFGGIRGGAASRTRGGRGGGVRRLWDPNNPDQKPALTGTKPSQHSSLQQPVYLQTGTGYG
QLHFLDTDDEVAGSPPVQQGEHLRSQQAAAMAYYKFQNSDNPYCYPMATSNPHNPGTTSN
QRYPYPYHMGPYQMAPPNGIYPSPGVGQFCGTYRGAGYSQPGAGGCLTFEEAEQQTRGEL
GRLLRAADAHELQLSNLLSRDRVSADGLDRMAQLRSDLLGLYEQVILTDIEFSDSQNVDQ
ALWKNVFYQVIEHFRQLLKDPTYDNTPHIRNMLLTLLDEGALFFDALLQKLQAMYQFKLE
DYMDGMAIRARPLRKTVKYALISAQRCMICQGDIARYREQASDSANYGKARSWYLKAQQI
APKNGRPYNQLALLAVYTKRKLDAVYYYMRSLAASNPILTAKESLMSLFEEAKRKTEQLE
RRRRQEYEGGSRGPAVRGRGRGEEGARVEIWIRPSGQATTSSSQRGGSESSRDSEQDGEL
GSLSATDLNKRFILSFLHAHGKLFTKVGMESFPGVASRVLQEFRTLLQHGPSLLGSTHML
QIITINMFTIHNAHSRGEEGEVRSVLQEQSTALGLGMFALLVQRCTELLKETPPEPVPMA
DGEEEGKVEELEGMVRVSAFPLELRELLPSIKVWSDWMLGQPDQWNPPPCSINCSPDVWQ
CLADLCNVLARVDHEEVPLYKVDTDEGEGDEELTVLQLKEDQLLAGFVPLLAAPQEPCYT
DRHTDMAIAADCKRVTVLKYFLEALCGQEEPLLAFKGGKYISVATSPLNHSIDTRSRQDS
LTEKEADDVILEAESSLSASEEEEDAEEAGDSESDIRQLKARRHVLANKLAQQQKRRDKI
QEVLQTSGQLELEVRPLFLVPDTNGFIDHLGGLKKLLQCGTYIIVVPLIVITELDGLAKG
QDTFGGGMGSGGRSTGSRGNYNVSAAHVRAVQEKARLAVAFLEKGFEAREPCLRALTSRG
NQLESIAFRSEDTSGQQGNNDDVILSCCLHYCKDKAKDFMPHQRNGTVRLQREVVLLTDD
RNLRVKALTRNVPVRDIPAFLSWAKVG
NT seq
4944 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacgaactagacagagtgcgaatctcagctgcggaactccgagctgaagcgtcg
aattcagtcaacattaccgactgtcagaaagaggaacaacgtgagcatcacatacacaag
cagcataggaggcgtgaaggaaagcggcctgatctacagcgctaccagccggtagctgga
catggaagacgtcacagggacagtgaggagggagacgctggtccaaaagatcccctagct
gccgattcacacgagcacaatcaaccattacagagtgtaaaaaagggtgtctatgaaagt
gagacacaagactgcacagagggagcgcctgctaccaacaaaagagaagaagacaggatg
agaggagacggcagtaatactcagaactgtagaaagggtagcttctcacaggctaaaatg
gattcaaatgatgaaaaaggctttgttgaaaatgacggagaacaccaggagcctgctgga
gctgccaagccaactagaaaagctcgaaaacctgacagagaattttatcaacctggcagc
cggaggaatattcagggaaaggactgcggagttgggagagagcaggataagcctccgcct
aggaagcctgagcaaaaagctgagctagaatccccgctgagtacagggggggaggtaaac
cagaaaaagccaatgcagaagcaagggaggaaagaagtaaacagaaggcaagaaagtcaa
gatgtggaaacacctccgttacctgttgatacgtcagtggagaaaattactagcaaagtt
gaaaaaataaacataaaagaaaagggtaaagtgggaggcccagctcaagatgctggagaa
ttaagttgcaagggaggagaagcaaatgataaggaaaggagaggccaaggggcaggttca
aaagacggggatgaaaaggcggagaagaagagagaacggggaaaccgcaggagaagggga
gtggacaaggaaaaggagaagaatcaggattccagaagagaagatgaaccaggtagtgga
ggaaagactgctcaggataaggttgagaaggaaagcgataagaaagctccagaagctgat
ggggaaaaaacagataaagcaggagagactcatcagagcaaaagaaaagagaatcataga
gaaaacagaagaggagaaaacaacaacagtaggtccagagatgctgataaagatcccaag
acagaaagaaatgtagacaggactgtagaaagaggtgacagaaacagatataatgcaaat
gtcacaacaccgacctcaaaacgctattctaaatcagatatccggcgctcacgcaatcga
acttacagcagtagctcagccagcagtgtgaccagcctggatggtcctggagtaggaaag
gatgtggaaggtagaaagtggttacactcagaacctcggcacagtaacaaacagcaggtg
gttaatagtggagaaggacgacggagtcatttaaaaagctggacaaccaacgaggaatca
tctacagaatcacaggaagcgagtgaaatgagtgacagagccgaagatcagagaaggaga
agaagaggtggggaggaagagaggcacagggaagaaacaaaccgaccaaagggaaacaaa
ggcggtggtggtcggggaatcctgagggtttctctagataaacagtcgggtacctcatca
catagtggggagacacaacatcgcaagcaaggggtggttcctcgtgggagaggcggggga
attctggtgcttccagcccgcacagacacctctaattcacctgaagtggggcaaaggctt
ctttttggtggaatcaggggaggagcagctagcaggaccagaggaggccgaggaggagga
gtgagacgactctgggacccaaataaccccgaccagaaacctgctcttaccggcacgaag
ccttcacagcattcatctctccagcagcctgtatatcttcagactgggactggatatgga
caacttcactttctggacacagatgatgaggtagcaggcagtcctccagtccagcagggt
gaacacttgcgttcccaacaggctgctgccatggcctactacaaattccaaaattcagac
aacccctattgctaccccatggccaccagtaaccctcataatcccggcaccaccagtaac
cagcgctatccatatccttatcacatgggtccctaccaaatggctccacctaacggtata
tacccgagccctggtgtgggtcagttctgtgggacttacaggggagcaggttactcccag
ccaggtgcaggaggttgtctgacatttgaagaggcagagcagcaaacaagaggggagctg
ggaaggctgctgagggctgcagatgcacatgagcttcagctcagtaacctgttgtccagg
gacagagtgagtgctgatggactggatcgcatggcccagctcaggtcggaccttttgggg
ctgtatgagcaggtcatcctgacagacatcgagttctcagactctcagaatgtggatcag
gctttgtggaagaacgtcttttaccaggtcatagagcacttccggcagctactcaaggac
cctacgtatgacaacacccctcatatcaggaacatgctgctcacactgcttgatgaggga
gcactgttctttgatgcgctacttcagaagctgcaggcaatgtaccagtttaagttagag
gattacatggatggaatggctatcagggctcggccactacgcaaaacggtaaaatatgca
cttataagtgctcagcgctgtatgatttgtcagggagacattgcacgttaccgggagcaa
gccagtgactctgccaactatggcaaggctcggagttggtacctgaaagcccaacagatt
gcccccaaaaatggacgaccatacaaccagctagcccttttggcagtttatacaaaacgg
aagttagatgctgtgtattattatatgcgcagcttggcggcttccaaccccattctgact
gcaaaggagagcctgatgagtctgtttgaggaagctaagcgaaagacagagcagcttgag
cgaaggaggaggcaggagtacgaaggaggctccagaggcccagcagtaagaggcagagga
agaggggaagagggagcacgtgtggagatctggattcgccccagtggacaagcaacaacc
tcgtcatcccagagaggaggcagcgagtccagcagagattctgaacaggatggagagctg
ggcagtctaagtgccactgacctaaataagagattcattctgagcttcctgcatgcacat
ggaaagctcttcactaaagtgggcatggaatccttccctggagtagcgagtcgtgttctg
caggagttcaggacgctgctccagcatggcccttcactactgggcagtacacacatgctg
caaataatcaccatcaacatgttcaccatacacaatgcacacagcagaggtgaagaagga
gaagtgcggtctgttttacaagagcaaagcactgccctgggccttggcatgtttgcacta
ctggtgcagcgctgcacagagctcctcaaagaaactcctccagagccagtccccatggca
gatggagaggaggaaggtaaagtggaggagttggagggtatggtgagagtctctgccttc
ccattggagcttagagaactgttgccaagcatcaaagtctggtctgactggatgttgggg
caaccagaccagtggaacccgccaccatgcagcataaattgcagccctgatgtgtggcag
tgcctggctgacctctgtaatgtcctggctcgtgtggatcatgaagaagtgccgctttac
aaagttgatactgatgaaggcgaaggagatgaggagctgacggtgctccagctgaaggaa
gaccagctgcttgctggctttgtaccactgctggctgcaccacaggagccatgttacaca
gacagacacactgacatggcaatagcagcggattgtaagagagtgacggtgctgaagtac
tttctggaggctttgtgtggacaggaagagcctctgctggccttcaagggaggcaaatac
atctctgtggcaacttccccacttaaccactcaatagatacgagaagcaggcaggattct
ctaacggagaaagaggctgatgacgtcatattggaggcagagtcgtctctctctgcatca
gaagaagaggaggatgccgaggaggcgggagacagtgagagtgacatcagacagctgaaa
gcacgacgtcatgtcctcgccaacaaactggcacagcaacagaaacgcagggataagata
caggaggtgctacagacaagtgggcagttggagctggaagtgaggcctctctttttggtt
ccagacaccaatggattcattgatcatttgggagggttgaagaaacttcttcagtgtgga
acatacataatagttgtgccactgattgtgattacagagttagatggtttggctaagggc
caagacactttcggtggaggtatgggttccggaggacgcagcaccggcagtcgtggcaac
tataatgttagtgcagcccatgtgagggccgtgcaagaaaaggctcggttggcagtggct
ttcttagagaaagggttcgaagccagagaaccatgcctcagggccctgaccagcagagga
aatcagctggagtctattgccttccgcagtgaagacacttctggacaacagggtaacaat
gacgatgtgattctgtcctgctgcctccactactgcaaagacaaggcaaaagatttcatg
cctcatcagagaaatgggacagtgaggctccagagggaggtggttctcctcacagatgac
cgtaacctgcgcgtcaaagctttgacccgcaacgtccccgtgcgagacatccccgctttc
ctgagctgggccaaagtgggctga
DBGET
integrated database retrieval system
