Amphiprion ocellaris (clown anemonefish): 111586464
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Entry
111586464 CDS
T06018
Symbol
ltbp1
Name
(RefSeq) latent-transforming growth factor beta-binding protein 1 isoform X1
KO
K19559
latent transforming growth factor beta binding protein 1
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
111586464 (ltbp1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
aoce04990
]
111586464 (ltbp1)
Domain-containing proteins not elsewhere classified [BR:
aoce04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
111586464 (ltbp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_CA
TB
cEGF
EGF
EGF_3
hEGF
FXa_inhibition
Plasmod_Pvs28
EGF_MSP1_1
EGF_2
EGF_PEAR1L
Motif
Other DBs
NCBI-GeneID:
111586464
NCBI-ProteinID:
XP_023151945
Ensembl:
ENSAOCG00000004319
LinkDB
All DBs
Position
16:22533595..22698083
Genome browser
AA seq
1496 aa
AA seq
DB search
MAWRTFGLLLSLGLVLSPVRVSAERQKTQSGFRRLYVLQPGPGPGSARADGSVRVSSIST
RHGPDRQPHTYNVELTANFGGPVRTRRMGNQAAAVPQQQAAVRQSEQEQLMKLSGVNVCG
GQCCHGWSKTQGSQRCTKPNCIPQCLNGGMCLRPQLCVCKPGSKGKACEQKTVPTHPFPA
VPGNGPTNGHNPGHTNGHTTGHNMVPQRPIPQQVSPNGYGSVPSSASNMAQMKVTVKTAP
QFVRPHYIQQHITQQIRPMPIHPGQNQQYVLKPKYYHTHSTHTQTHVQPERPIPLTVGHN
PINVGNHTGRIKVVFTPTICKLTCIGGRCHNNCELGNTTTIISENGHATDTLTAPNFRVV
VCHLPCMNGGKCSTRDKCQCPPNFTGKFCQMPVQNGHQQTSGGFSQTQVHSTHTLPLTYS
NGQTPVFSPSIVNIHIKHPPEASVQVHQVSQLDSYHNNGHQLKGSQAGSSSSTSYSYHHA
ESSQHHGYNIVYPSQHGYQVPQYQPVTSKNTLGRCFQETAGSQCGKALPGLTKQEQCCGT
IGTSWGFHKCQKCPKKPSIPLIDCPHGYKRINSSHCQDLDECQLQGVCPNGNCLNTVGSY
RCMCKADYVPDPTLTKCISNTPAVQEEKGACFRLVSSGRQCLHPVSAQLSKQLCCCSVGK
AWGPRCDKCPPPGTAKFKEICPGGMGYTVLPNPPVQKPVTVYQEPTHLLPPQPLPTPERP
VEAFGEPEDTIPVATTAPDQELVVPVVSNRPVVEPILPQLSPGVSTVKMEAAYPEVVERT
SPPAPVEILPSNAGQDIAPTQSAEVDECQINPYICGQGICYNTAESYTCHCDEGYHLDDA
QTTCVDIDECESRTMCPSGICFNVPGSYNCGSCSDGFIGQGGQCEDIDECQDQQVCTRGH
CQNTEGSFICHCGPGFRVSPTGDQCDDVDECVEEARPCEPVGECANNMGSYTCTCPQGYR
QINGISCGDVDECMEEAELCSPHGKCHNTDGSYQCVCDSGFTANLDTPSCDDIDECGLNE
TLCGPHGFCENRLGSFQCLCDQGYQETQDGQSCVDVNECELLSSVCGEAQCMNVDGSFFC
VCPNGQEYNVMNAKCEPVPTASSVERKECYYHLNDENLCESVLTSHVTLQECCCTLGAGW
GDNCEVHPCPVNGTDQFNEMCPSGRGFIPNGDLLYGVPTSDIYKDADECTLFGQEVCKGG
FCLNTEGGYECYCKTGQDYDPAKLECKGQDIDECLDESVCVGGQCLNTDGSYMCFCTHPM
VLDPSSNRCVFIPDVAEQHETKQIEYLGICWQTLTESMTCTRPVGNNRKTTYTECCCLYG
EAWGMDCALCPPRNTEDYASMCNLPIGGGRRPYGHDALVASPVHEYEVSPDYSPSPEQHP
ALTFYENEEHPYKAFEGLRAEECGILNGCENGRCVRVQEGYTCDCFDGYTLDLSRMACID
VNECSELNNRMSLCKNAKCINTVGSYQCVCLPGFKASDKANYCVEAETQQTSTRTQ
NT seq
4491 nt
NT seq
+upstream
nt +downstream
nt
atggcttggagaacattcggcctcttgctttccctcggtctggtactctctccggttcgt
gtgtcagcggagcggcagaagactcagagcggcttcaggaggctgtatgtgctgcagccc
gggccggggccagggtcggcccgagcggacggttcagttcgagtcagctccatctcgacg
cgacacggcccggacaggcagccgcacacatacaacgtggagctcaccgccaacttcggc
gggccggtccggacccgcaggatggggaaccaagcggccgcagtcccgcagcagcaagca
gccgtgaggcagagcgagcaggagcagctcatgaagctgtccggggtgaatgtctgtgga
gggcagtgctgtcatggatggagtaaaactcagggatcgcagcggtgcacaaagcccaac
tgtatccctcagtgcctgaatggaggaatgtgcctcaggcctcaactctgtgtctgcaaa
cctggctcaaaggggaaggcatgcgagcagaagacggtgcccacacacccctttccggca
gtgcctgggaatggaccaaccaacggccacaaccctggtcacacaaatggacacactact
ggacacaatatggtaccccagcggcccattcctcagcaagtgtctcctaatggttatggc
tctgtaccctcttcagcaagcaacatggcccagatgaaagtaactgtcaagacagcacca
cagtttgtgcgaccccattacattcaacaacacatcacacaacagatccggcccatgcct
atacacccaggtcagaaccagcagtatgttttaaagcccaaatactaccacacacactcc
acgcacacacagacgcatgtccagcctgagaggccgatccccctaacagtcggacacaat
cccatcaatgtgggcaaccatacaggaaggatcaaggtggtcttcacacccaccatctgc
aaactgacctgcatagggggccggtgccacaacaactgtgagctgggaaataccaccacc
atcatcagtgaaaatggccacgccacagacaccctgacagcacccaacttcagagtagtg
gtgtgtcacctgccttgtatgaacggtggcaagtgcagcaccagggataagtgccagtgc
cctccaaactttacaggaaagttctgccagatgccagttcagaacggacaccagcagaca
tcaggaggcttcagccaaactcaggtccactccacacacactctgcctctgacgtacagc
aacggccaaactcccgtgttcagcccaagcatcgtcaacatccacatcaaacaccctcca
gaggcctctgttcaggtgcaccaggtgtctcagctggacagttaccacaacaacgggcac
cagctgaaaggctcccaggcaggctcctcttcatccaccagctacagctaccatcatgcc
gagagcagccagcatcacggctacaacatcgtctatcccagccagcacggctaccaggtt
cctcagtaccagcccgtcacctcaaagaacacgctgggtcgctgctttcaggagacggca
ggcagtcagtgtgggaaggctctaccgggtctcactaagcaggagcagtgctgtgggacc
attgggacctcctgggggttccacaaatgccagaagtgtccaaagaaaccatctatccct
ctgatagattgtcctcatggctacaagagaatcaacagttcccattgccaagatttggat
gaatgccagttgcagggtgtgtgtcctaatggaaactgtctgaacactgtgggcagttac
aggtgcatgtgtaaagctgactatgtacctgacccaacgctcaccaaatgcatatccaac
acgcctgccgtccaagaggagaagggggcttgcttccgtttggtcagctcagggaggcag
tgtttgcacccagtgtctgcccagctgagcaaacagctctgctgctgcagtgtgggcaaa
gcctggggccctcgttgtgacaaatgcccccctccaggaacagctaaattcaaagaaatt
tgtcctggtggaatgggatacactgttttgccaaatcctccggtacaaaagccagtgact
gtttaccaggagcccactcacctgttacctccacaacccctgccgaccccagagagaccg
gtggaggcttttggggaaccagaagatactataccagtagcaacaactgcaccagatcag
gagctggtagtgcctgtggttagcaataggccagtagttgaacctatcctgccccagcta
tctccaggtgtgtccactgtcaagatggaggctgcctacccagaggttgttgagaggacc
tctcctcctgcaccagtggagatcctcccatctaatgccggccaggacatcgctcccacc
cagtcagctgaggtggatgagtgccagatcaacccttatatttgtggccaggggatttgc
tacaacacagctgagagctacacctgccactgtgatgagggataccacctggatgatgcc
caaaccacctgtgtagatattgatgaatgtgaaagcaggacaatgtgtccttctggtatc
tgcttcaacgtaccagggagttacaactgtggctcctgctctgatggctttataggacaa
ggaggccaatgtgaagatatagatgagtgccaggatcagcaagtgtgtaccagaggccac
tgccagaacactgaaggctcctttatctgtcattgtgggccaggcttcagagtgtcacca
actggagatcagtgtgacgatgtggatgaatgtgtagaggaagccagaccctgtgagcct
gtaggggagtgtgccaacaacatgggctcttacacctgtacctgcccccaggggtaccga
cagatcaacggcatcagctgcggagatgttgatgagtgcatggaggaagcagagctctgt
tcgccccacggcaagtgccacaacactgacggatcctatcagtgtgtgtgtgacagtgga
ttcactgccaacctcgacacgccctcctgtgacgatattgatgagtgcggcctcaatgag
acactgtgtggccctcatggcttctgtgagaacagactgggttcgttccagtgcctctgt
gaccagggctaccaggagacccaggatggccaaagctgtgtggatgtgaatgagtgtgag
ctgctcagcagtgtgtgtggagaggcccagtgcatgaacgtggatggttccttcttctgt
gtgtgtcccaacggtcaagaatacaacgtcatgaacgccaagtgtgagcccgttcccaca
gcatcatcagtggagcggaaagagtgctactaccatctgaacgatgagaacctgtgtgag
agtgtgctgaccagccatgtcacactgcaggagtgttgctgcactctgggagctggctgg
ggggacaactgtgaggtgcatccttgccctgtcaatggtacagatcagtttaacgagatg
tgtccatctggaagaggttttattcccaatggagacctgctatatggagtacctacatct
gacatctacaaagatgcagatgaatgtacactgtttggtcaggaagtgtgtaaaggaggc
ttctgtctgaatactgagggaggctacgagtgttactgcaagactggacaggattatgac
cctgcaaagctggaatgcaaaggtcaagacatagatgagtgtctagatgagtcggtgtgt
gttggtggtcagtgtctcaacacagatggctcatacatgtgtttctgtacacatccaatg
gtgttggatcccagcagtaaccgctgtgtcttcattcctgatgtggccgagcaacatgag
accaagcagatcgaatatctgggtatctgctggcagacgttgacagaaagtatgacgtgc
acccgaccggtgggcaacaacaggaagaccacctacacagagtgctgctgtctgtatgga
gaggcctggggcatggactgtgccctgtgtccccccaggaacaccgaggactatgcctcc
atgtgtaaccttcccattggtggcgggcgccggccgtatggtcacgatgcacttgttgcc
agtccggttcatgaatatgaagtgagcccagactattcaccatcacctgagcagcatccg
gccctgaccttttatgaaaacgaagagcatccatacaaggcattcgagggtttgagagca
gaggagtgtgggatactgaacggctgtgagaacggtcggtgtgtccgggttcaggagggt
tacacctgcgattgctttgatggatacacccttgatctgtcccgcatggcctgcattgat
gtgaacgagtgttcagaactgaacaaccggatgtcgttgtgtaaaaatgcaaagtgcatc
aacacagtgggttcctatcagtgtgtgtgtctgccaggcttcaaggcctcagacaaagcc
aactactgtgtggaggcagaaacacagcaaacatccacacgcacacagtga
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