Arthrobacter oryzae: Q8Z05_14330
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Entry
Q8Z05_14330 CDS
T09304
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
aod
Arthrobacter oryzae
Pathway
aod03030
DNA replication
aod03410
Base excision repair
aod03420
Nucleotide excision repair
aod03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aod00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Q8Z05_14330 (ligA)
03410 Base excision repair
Q8Z05_14330 (ligA)
03420 Nucleotide excision repair
Q8Z05_14330 (ligA)
03430 Mismatch repair
Q8Z05_14330 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aod03032
]
Q8Z05_14330 (ligA)
03400 DNA repair and recombination proteins [BR:
aod03400
]
Q8Z05_14330 (ligA)
Enzymes [BR:
aod01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
Q8Z05_14330 (ligA)
DNA replication proteins [BR:
aod03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Q8Z05_14330 (ligA)
DNA repair and recombination proteins [BR:
aod03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
Q8Z05_14330 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Q8Z05_14330 (ligA)
MMR (mismatch excision repair)
DNA ligase
Q8Z05_14330 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Q8Z05_14330 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
DNA_ligase_ZBD
Nlig-Ia
HHH_5
PTCB-BRCT
HHH
BRCT_2
Motif
Other DBs
NCBI-ProteinID:
WLQ05305
LinkDB
All DBs
Position
3145178..3147469
Genome browser
AA seq
763 aa
AA seq
DB search
MSTGNTAADTETQRTSGANSSQEGATRETVPSGAVREEYENLVEEVRKHRFAYYQEDTPL
ISDAEFDELFRRLETLEAMHPELVANDSPTQEVGGEVSAAFSAVEHLQRMYSLEDVFSLE
ELEAWIAKAEASVAKLGNGTPAWLTELKIDGLAVNLLYRDGKLVRAATRGDGYTGEDITH
NVLTIKEIPQQLTGGNYPAEMEVRGEVFIPSKAFAEFNEALIEAGKAPLANPRNAAAGSL
RQKDPAETAKRPLRMYVHGIGAREGLATVSQSDTYRQLAEWGLPTSPYFEVLGSLQEVLD
FIKRYGDKRHSLTHEIDGIVVKVDDFATQRALGYTSRVPRWAVAYKYPPEEVHTKLLDIA
VNVGRTGRVTPFGIMEPVKVAGSTVGMATLHNQDVVKAKGVKIGDIVVLRKAGDVIPEIV
GPVLALRDQQDPPVRDFVMPTDCPSCGTPLAPGKEGDVDIRCPNSRSCPAQLRERVFHVA
SRGAFDIEALGWEAAIALTQPAEPETPPLTSEATLFRLGREDLADVRIRREKRSKGVATG
EFELVPYFYTKGTAKTPSKPTATTEKLFAELEKAKTQPLWRVLVALSIRHVGPRASRALA
TAFGSMDAIRQASEEDLAHVDGVGPVIAAALKEWFAEDWHREIVDTWAQDGVRMEDEQDE
STPRTLEGLTIVVTGSLEGFSRDEAKEAILIRGGKAAGSVSKNTSYVVAGENAGTKLDKA
EQLGVPVLDEDGFRELLANGPAVAPDDASDADDPEDRQEGQAE
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
gtgagcacagggaacacggcagcagacactgaaacgcaacgcacatccggggcaaactca
agtcaggaaggcgccacccgggaaacggtgccttcgggggcagtgcgtgaggaatacgaa
aacctggtcgaagaggtccgaaagcaccgcttcgcctactaccaggaagacacgcccctc
atctcggatgctgagttcgacgaactgttccggcgcctcgaaacgctcgaggccatgcac
ccggagctggtggccaatgattcacccacgcaggaagtgggcggcgaggtgtccgccgcc
ttttccgccgtcgaacacctgcagcggatgtacagcctggaggacgtcttttccctcgaa
gaacttgaggcgtggatcgccaaggcggaagcctccgtggccaaactggggaacggaacc
ccggcctggctcacagaactcaagatcgacggactggcggtgaacctgctctaccgcgac
ggcaaactggtccgcgccgccacgcggggtgacggctacaccggtgaggacatcacccac
aacgtcctgaccatcaaggagattccacagcagctgacgggcgggaactatccggccgag
atggaagtccgcggcgaggtgtttattccgtcaaaggccttcgccgagttcaacgaggcc
ctgatcgaagccggcaaggccccgctggcgaacccccgcaatgccgccgccggctcgctg
cggcaaaaggatcccgcggaaaccgccaagcgcccgttgcgcatgtacgtgcacggcatc
ggcgcccgcgaaggcctggcaaccgtcagccagtccgacacctaccgccagctcgccgag
tggggcctgcccaccagtccgtacttcgaggtcctgggcagcctccaggaagtgctcgac
ttcattaagcgctatggcgacaagcggcacagcctgacgcatgagatcgacggcatcgtg
gtcaaggtggatgacttcgccacccagcgtgcactcgggtacacctcgcgggtgccgcgc
tgggctgtcgcctacaagtacccgccggaggaagtccacaccaagctgctggacatcgcc
gtgaacgtgggccgcacaggccgcgtcacccccttcggcatcatggaacccgtgaaagtt
gccgggtccacggtcggaatggccaccctgcacaaccaggatgtcgtcaaggccaagggc
gtgaagatcggcgacattgtggtgctccgtaaggccggggacgtcatcccggagatcgtg
gggccggtgctcgcgctgcgggaccagcaggacccgcccgtgcgcgattttgtgatgccc
acggactgcccgtcctgcgggacgccgcttgcccccgggaaggaaggggacgtggacatc
cgctgccccaactcacggtcctgcccggcccagctgcgtgaacgcgtcttccacgtggcc
agccgcggcgccttcgacatcgaagcgctcggctgggaagccgccatcgcactgacgcag
ccggccgagccggagaccccgcccctgaccagcgaagccacgctcttccggctcgggcgc
gaagaccttgccgacgtccggatccgccgtgagaaacgctccaagggggtggcaacgggc
gaattcgaactcgtgccgtatttctacaccaagggcacagccaagacgccgtccaagccg
acggccaccacggaaaagctcttcgccgaactggaaaaagccaagacccaaccgctgtgg
cgggtcctcgtggcgctctccatccggcacgtcgggccgcgggcgtcgcgggctctggcc
accgccttcggctcaatggacgccatcaggcaggcgtcggaggaggacctcgcccacgtc
gacggcgtgggcccggtgatcgcggccgccctgaaggaatggtttgccgaggactggcac
cgcgagatcgtggacacctgggcacaggacggcgtgcggatggaggacgagcaggacgag
tccacgccgcggaccctcgaggggctgaccattgtggtcaccggcagcctcgaaggcttc
agccgggacgaagccaaggaagcgatcctgatccggggcggcaaggccgcaggatccgtc
tctaaaaacacaagctacgtggtggcaggcgagaacgccggaacaaagctggacaaggcc
gagcagctcggcgtgccggtgctggacgaggacggtttccgcgagctcctggccaacggc
cccgccgtcgccccggatgacgccagcgacgctgatgacccggaggaccgccaggaaggg
caggcggaatga
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