KEGG   Asparagus officinalis (garden asparagus): 109823648
Entry
109823648         CDS       T05243                                 
Name
(RefSeq) survival of motor neuron-related-splicing factor 30-like isoform X1
  KO
K12839  survival of motor neuron-related-splicing factor 30
Organism
aof  Asparagus officinalis (garden asparagus)
Pathway
aof03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:aof00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109823648
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:aof03041]
    109823648
Spliceosome [BR:aof03041]
 Complex A
  U2 snRNP components
   U2 related factors
    109823648
 Complex B
    109823648
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    109823648
SSDB
Motif
Pfam: SMN_Tudor TUDOR Agenet SBP_bac_10 Tudor-knot
Other DBs
NCBI-GeneID: 109823648
NCBI-ProteinID: XP_020245547
LinkDB
Position
9:5104716..5116850
AA seq 299 aa
MEGGEDVSMEELASNLSTYKDQLHQVRKLLVDEPGNSEYADMEKELEEVIGLTEELLTTA
KQNEQSGLISHQDANISPGQEPLTGTSQFNTGSSNHEGFPVGTKVQAVWSEDGEWYDATI
EAITPNGYYVRYNEWGNKEEVDPGNVRQIQDGTINPLLEAEKEAEATRQAIKRKIAQAAV
SDFQSRSLPAKLRIDPNDPEDVKAAKRKKIHAFKSKARFEQLEVVQNKRQNAWQQFQTTK
GKTKKIGFFSGRKRDSIFKSPDDPKGKVGVTNSGKGLTDFQRREKYLQLKGANIDNEDD
NT seq 900 nt   +upstreamnt  +downstreamnt
atggagggaggcgaagatgttagcatggaggagctcgcctcgaatctctcaacctacaaa
gatcagcttcatcaggttagaaaacttttggttgatgagccgggaaactcagagtatgca
gacatggaaaaggagcttgaagaggtaattggtcttacggaggaactcttaaccactgca
aagcaaaatgaacaatctgggctgatatctcatcaagatgccaatatatctccaggacag
gagccgttaactggaacttcacagtttaatacaggatcaagtaatcatgaagggtttcct
gttggcacaaaagttcaagctgtttggagcgaagatggggagtggtatgatgcgaccatt
gaggctattactcctaatggatactatgtccgctacaacgaatggggaaacaaagaggag
gtggatcctggaaatgtgaggcaaattcaagatggcacaattaatcccttgctagaagct
gaaaaggaagctgaagctaccaggcaagccattaaacgaaagattgcacaagcagcagtt
tctgacttccagtcacgaagcttgcctgcaaaacttcgcatagatcctaatgatcctgaa
gatgtgaaagctgctaaacgtaagaagatacatgcatttaagtcaaaagctcgttttgag
caacttgaagttgtgcaaaacaaacggcaaaacgcttggcaacagtttcagacgacaaag
ggaaaaacaaagaagattggtttcttctcagggcgcaaacgagacagcatcttcaagtct
ccagacgatccaaagggtaaagttggagtaaccaacagcgggaaaggactgaccgacttc
caaaggagggagaaatacttgcaactcaagggcgcaaatatcgataacgaggacgactag

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