Asparagus officinalis (garden asparagus): 109823792
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Entry
109823792 CDS
T05243
Name
(RefSeq) sm-like protein LSM3B
KO
K12622
U6 snRNA-associated Sm-like protein LSm3
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof03018
RNA degradation
aof03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109823792
09123 Folding, sorting and degradation
03018 RNA degradation
109823792
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aof03019
]
109823792
03041 Spliceosome [BR:
aof03041
]
109823792
Messenger RNA biogenesis [BR:
aof03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
109823792
mRNA degradation factors
5'-3' decay
Lsm complex
109823792
Spliceosome [BR:
aof03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
109823792
Complex C
U2 snRNP components
109823792
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
TIG_SUH
Glutaredoxin
Motif
Other DBs
NCBI-GeneID:
109823792
NCBI-ProteinID:
XP_020245757
LinkDB
All DBs
Position
9:complement(2054575..2058836)
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AA seq
97 aa
AA seq
DB search
MASEEESAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEIITTVE
IDDETYEEIVRTTRRTVPFLFVRGDGVILVSPPLRTA
NT seq
294 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcgaggaggagagcgcagtgaaagagcccctcgatctcatcaggctcagcctc
gacgagcgcatctacgtgaagctccggtccgaccgagagcttcgtggaaaactccatgct
tacgatcagcatttaaatatgatacttggagatgtagaagaaattataacaacggtagag
attgatgatgaaacatatgaagaaatagttcggaccactaggcgaaccgtcccatttctt
tttgtcagaggagacggtgtgatcctggtttcaccgcctctgaggacagcctga
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