KEGG   Asparagus officinalis (garden asparagus): 109828983
Entry
109828983         CDS       T05243                                 
Name
(RefSeq) RING-box protein 1a-like
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
aof  Asparagus officinalis (garden asparagus)
Pathway
aof03420  Nucleotide excision repair
aof04120  Ubiquitin mediated proteolysis
aof04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:aof00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    109828983
   04120 Ubiquitin mediated proteolysis
    109828983
  09124 Replication and repair
   03420 Nucleotide excision repair
    109828983
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:aof04121]
    109828983
   03400 DNA repair and recombination proteins [BR:aof03400]
    109828983
Enzymes [BR:aof01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     109828983
Ubiquitin system [BR:aof04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   109828983
  Multi subunit type E3
   SCF complex
    Ring finger protein
     109828983
   Cul2 complex
     109828983
   Cul3 complex
     109828983
   Cul4 complex
     109828983
   Cul7 complex
     109828983
   Cul8 complex
     109828983
   Cul9 complex
     109828983
DNA repair and recombination proteins [BR:aof03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      109828983
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      109828983
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 zf-RING_16
Other DBs
NCBI-GeneID: 109828983
NCBI-ProteinID: XP_020251599
LinkDB
Position
1:111517773..111526879
AA seq 133 aa
MASLDTDINMVPAGEGSSAAATATATKPKRFEIKKWNAVALWAWGKPPIPLYKLGFLFFA
DIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCP
LDNSEWEFQKYGH
NT seq 402 nt   +upstreamnt  +downstreamnt
atggcgtctctagacaccgacatcaacatggtccccgctggcgaggggtcgagcgccgcc
gccaccgccaccgccaccaagccaaagaggttcgagatcaagaagtggaacgctgtcgcc
ctctgggcttggggtaagcctccgattcctctctacaaacttggttttttgttttttgca
gatatcgtggtggacaactgcgctatttgcaggaaccacatcatggatctctgcatcgag
tgtcaggcgaatcaggcgagtgccacgagtgaggagtgcaccgtggcctggggagtttgc
aatcacgccttccactttcactgcatcagtaggtggctcaagaccagacaagtgtgccct
ttagacaacagcgagtgggagttccagaaatatggccactag

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