KEGG   Asparagus officinalis (garden asparagus): 109830373
Entry
109830373         CDS       T05243                                 
Name
(RefSeq) sm-like protein LSM3B
  KO
K12622  U6 snRNA-associated Sm-like protein LSm3
Organism
aof  Asparagus officinalis (garden asparagus)
Pathway
aof03018  RNA degradation
aof03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:aof00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109830373
  09123 Folding, sorting and degradation
   03018 RNA degradation
    109830373
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aof03019]
    109830373
   03041 Spliceosome [BR:aof03041]
    109830373
Messenger RNA biogenesis [BR:aof03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     109830373
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     109830373
Spliceosome [BR:aof03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    109830373
 Complex C
  U2 snRNP components
    109830373
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 109830373
NCBI-ProteinID: XP_020253214
LinkDB
Position
2:15487416..>15488692
AA seq 68 aa
MASEEESTVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEIITTVE
IDDETYEE
NT seq 204 nt   +upstreamnt  +downstreamnt
atggcgagcgaagaggagagcacagtgaaagagcccctcgatctcatcaggctcagcttg
gacgagcgcatctacgtcaagctccgatccgatcgagagcttcgtggaaaacttcatgct
tatgatcagcacttgaatatgatacttggagatgtagaagaaattatcactacagtagag
attgatgacgaaacatatgaagag

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