Asparagus officinalis (garden asparagus): 109833058
Help
Entry
109833058 CDS
T05243
Name
(RefSeq) transcription factor PIF4-like isoform X1
KO
K16189
phytochrome-interacting factor
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
109833058
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aof03000
]
109833058
Transcription factors [BR:
aof03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
109833058
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
109833058
NCBI-ProteinID:
XP_020256189
LinkDB
All DBs
Position
3:complement(13077411..13088670)
Genome browser
AA seq
437 aa
AA seq
DB search
MQSQTNRKPQATLRPEPQPKPVVSVVNSSNLMQEDETASWFQYAFDYPLEKELCSELLDE
MPMADAIDANKPNKEVIRDAEKNPFTMPPPKSQTTRLGNFSHFSRPMRGDVGESSSIRTV
GSSACGSNQVPNQGDVSNNLSRGVFEKRSKGRGPMISLQEGVHANTFDTTVTSSSGGSGC
SFGRTTGQQSTSDQNNKRKGRDAEESECHSEEAEYESIEAKKHTQRPTSTRKSRAAEVHN
LSERRRRDRINEKMKALQELIPHCNKSDKASMLDEAIEYLKSLQLQLQLMWMGSGMAPMM
FPGIQQYMPRVGVGMGHTSIPPINNPMQLSRTPLVNHSMPSSAPSNQMPMCPSPSLNPAN
FQNVHHIPEPYARYFGFSHMQLPPQAVNLYSYGSQMVQQQNQTAAVAGSSSLPTSGIPME
NLQNGHSVVGFAGSLLH
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagccaaactaatcgaaaacctcaagcaacgctgagacccgaaccccagccgaaa
cctgttgtctctgtggtaaactcaagcaatttaatgcaagaagatgaaactgcttcatgg
ttccaatatgctttcgattatccattagagaaagaattgtgctcggaattactcgatgaa
atgcctatggcagatgctattgatgctaacaaaccgaacaaagaagtcatcagagatgca
gagaaaaatcctttcacaatgcctccacctaagtctcaaactacacgtttaggtaatttt
tctcacttctcgaggccaatgaggggcgatgtgggagaatcatcatctattaggacagta
ggatcgagtgcttgtgggagtaaccaagttccaaatcaaggtgatgtgagcaacaatttg
agcaggggtgtatttgaaaaaaggtcaaaaggcagaggaccgatgatttcgcttcaagaa
ggagttcatgcaaatacatttgatactactgtgacttcttcatccggtgggtctggttgt
agttttgggaggacaacagggcagcagagtacgagcgatcagaacaacaagagaaagggg
agagatgcagaggaatctgaatgccatagcgaggaggctgaatatgaatcgattgaggct
aaaaagcacactcaacggcctacatccaccagaaaaagccgtgctgctgaagttcacaat
ctatcggagcggagaagaagagacagaattaatgagaagatgaaagcattgcaagaactc
attcctcattgcaacaagtcagacaaagcttcgatgctagacgaggcaattgagtactta
aagtcgctacaactacaacttcagctaatgtggatggggagcggcatggcaccaatgatg
tttccgggcatacaacagtacatgccacgggtgggtgtaggcatgggtcatacttctatt
ccccccatcaataacccaatgcaattatcaagaaccccacttgtcaatcattctatgccc
tcatcggctccttcgaaccaaatgccaatgtgcccatctccgtccttgaatccagctaat
ttccaaaatgtccatcatatcccagaaccatatgctcggtactttggcttctcccacatg
caactgcctccccaggctgtaaatttatattcatatggatctcaaatggtgcaacagcag
aatcagacagcagcggttgctggaagtagtagcttgccgacatctggtattccgatggag
aatctacaaaatggtcactctgttgtaggttttgctggttctctcttgcattga
DBGET
integrated database retrieval system
