Asparagus officinalis (garden asparagus): 109833167
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Entry
109833167 CDS
T05243
Name
(RefSeq) LOW QUALITY PROTEIN: NHP2-like protein 1
KO
K12845
U4/U6 small nuclear ribonucleoprotein SNU13
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof03008
Ribosome biogenesis in eukaryotes
aof03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109833167
09122 Translation
03008 Ribosome biogenesis in eukaryotes
109833167
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aof03041
]
109833167
03009 Ribosome biogenesis [BR:
aof03009
]
109833167
Spliceosome [BR:
aof03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
109833167
Ribosome biogenesis [BR:
aof03009
]
Eukaryotic type
Sno RNPs
Box C/D snoRNPs
109833167
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_L7Ae
PELOTA_1
RNase_P_pop3
Motif
Other DBs
NCBI-GeneID:
109833167
NCBI-ProteinID:
XP_020256317
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Position
3:15841213..15845033
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AA seq
128 aa
AA seq
DB search
MGTEVAVNPKAYPLADAQLTITILDLVQQAANYKQLKKGANEATKTLNRGISEFIVMAAD
XPLEILLHLPLLAEDKNVPYVFVPSKQALGRACGVTRPVISCSVTSNEASQLKSQIQQLK
DAIEKLLI
NT seq
387 nt
NT seq
+upstream
nt +downstream
nt
atgggcacagaagttgctgtgaatccaaaggcctatcctttggccgacgctcagctgaca
atcacaatcttagacctcgtgcagcaagctgctaactacaagcagctcaaaaaaggcgca
aatgaagcgacgaagacgctaaatcgggggatttcggagtttattgtgatggcggctgat
nnaccgctggagattcttctccatcttcctttacttgcggaggacaagaatgtcccctac
gtatttgttccatccaaacaagcactaggtcgagcttgtggagtcacaaggccagtgatt
tcttgctcagtgactagcaacgaagccagccagctgaaaagccagatacagcaactgaag
gatgctattgagaagctcctgatctga
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