Asparagus officinalis (garden asparagus): 109834225
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Entry
109834225 CDS
T05243
Name
(RefSeq) isoleucine--tRNA ligase, cytoplasmic
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
109834225
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
aof01007
]
109834225
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aof03016
]
109834225
Enzymes [BR:
aof01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
109834225
Amino acid related enzymes [BR:
aof01007
]
Aminoacyl-tRNA synthetase
Class I (U)
109834225
Transfer RNA biogenesis [BR:
aof03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
109834225
Prokaryotic type
Other AARSs
109834225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
DUF5915
tRNA-synt_1g
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
109834225
NCBI-ProteinID:
XP_020257793
LinkDB
All DBs
Position
3:61170298..61211359
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AA seq
1037 aa
AA seq
DB search
MDPSFMESVWWVFAQLYDKGLVYRGFKVMPYSTGCKTPLANFEAGLNYKEVSDPAIMVSF
PLIGDPDNAALVAWTTTPWTLPSNLALCVNAGFQYVKVRDKLTGATYIVAESRLSQLPVK
KPKGDGSSLKQSSANSKPKSKDTPDGKTKCTVDTGSYEVLEKISGASLVGMKYEALFDYF
KECADMAFRVVADDYVTDDSGTGVVHCAPAFGEDDYRVCIASGIVRKDEELIVAIDADGR
FIEKVYDFQGRHVKDADKDILNAVKAKGRLVNSGSIMHSYPFCWRSETPLLYRAIPSWFV
AVEKIKDKLLESNKQTYWVPDYVKEKRFHNWLENARDWAVSRSRFWGTPLPVWISEDGVE
KVVIDSIDKLEKLSGAKVTDLHRHHIDHITIPSNRGPEFGMLRRVDDVFDCWFESGSMPY
AYIHYPFENVELFEKNFPGHFVAEGLDQTRGWFYTLMVLSTALFGKPAFRNLICNGLVLA
EDGKKMSKRLKNYPSPMEVIGEYGADALRLYLINSPVVRAESLRFKKDGVYGVIKDVFLP
WYNAYRFLVQNAKRLEIEGSAPFIPIDRQALQLSSNVLDQWINSATGSLVRFVRQEMEAY
RLYTVVPYLLKFIDNLTNIYVRFNRKRLKGRTGEEDCRTSLSTLYHVLLTTCIAMAPFTP
FFTEALYQNLRKAFHSSEESIHYCSFPSATGKIEERIEQSVTRMMTVIDLARNIRERHNK
PLKTPLKEMIVVHPDAGFLEDIAGKLKEYVMEELNVKSVVPCSDLLKYASLRAEPDFSVL
GKRLGKAMGLVAKEVKAMSQADILAFEKSGEVTFSGNCLKSTDIKVLREFKRPADVTEKE
IDAAGDGDVLVILDLRADESLYESGIAREVINRIQKLRKKAGLEPTDIVEVYYEPLNDDK
HVLTNIVKSQEQYIRDALGSPLLQHTMAPDYAVVLCGEEFQGVSGLSFSINIARPAPVFV
SDAILDLYNGNKKLAEDLETYLLSRDLLKLKSKFQVGNGKIKVNCIVDHPAVEIEVGKHL
FLSVGDYFLSRAENFHQ
NT seq
3114 nt
NT seq
+upstream
nt +downstream
nt
atggacccgagttttatggagagcgtctggtgggtttttgctcagctttatgacaaggga
ttggtgtacaggggtttcaaggttatgccttacagtacaggttgcaagactcctcttgcc
aattttgaagctgggctcaactacaaggaagtgtcagatccggcaattatggtgtctttc
cctttaattggggacccagacaatgctgctcttgtcgcatggacaacaaccccatggacg
cttcccagtaatcttgcactctgtgtcaatgcaggtttccaatatgttaaggttagggac
aagttgactggtgcaacatatattgttgcagaatctcggctttcccagctacctgtaaag
aaaccaaaaggagatgggtcgagcttgaagcaaagctcagcaaactcaaagcctaagagc
aaggacactccagatggaaaaactaagtgcacagtggatactggatcatatgaagtgttg
gaaaaaatttcaggcgcttcccttgtgggcatgaagtatgaagctttgttcgactatttc
aaagagtgcgcagacatggcatttagggtggttgctgatgattatgtcacagatgatagt
gggactggggttgtccattgtgctcctgcatttggtgaagatgattatcgtgtttgcatt
gcttctggtatagtacgtaaggatgaggagctcatagttgcaattgatgctgatggacgc
tttattgaaaaagtatacgattttcaaggacgccatgtcaaggatgctgataaggacatc
ttaaatgctgtgaaggcaaaaggaagacttgtaaattcaggaagcattatgcattcttac
ccattttgttggagatctgaaactccactcttgtatagggctattccgagttggtttgtg
gcggttgaaaagattaaagataaattgcttgagagtaacaaacagacgtactgggttcct
gattatgttaaggaaaagcgttttcacaattggcttgaaaatgctagagactgggctgtg
agcagaagtaggttttggggaactcctctacctgtatggattagtgaggatggtgtggag
aaagttgtaattgattcgattgataaacttgaaaagttgtctggtgcaaaggttactgat
ctgcaccgtcatcacattgatcatatcactattccctctaatcgtggtcctgaatttggt
atgcttcggcgtgttgatgatgtttttgattgctggtttgagagtggctctatgccatat
gcttatattcactatccattcgagaacgttgaactctttgagaagaactttcctggacac
tttgttgccgagggccttgaccaaactcgtggatggttttacactcttatggtgctctct
acggctttgtttggaaaacctgccttcaggaatctgatctgtaatggtcttgtcctggct
gaggatgggaaaaaaatgagcaaaaggttgaagaactatccctcacctatggaagttata
ggtgaatatggtgctgatgcattgcgattatatctaattaattcacctgttgtgcgtgcg
gaatctctgaggttcaagaaagatggtgtatatggtgttatcaaagatgtcttccttccc
tggtataatgcctatagattccttgttcaaaatgcaaaaagacttgagattgagggctct
gcaccatttatacctattgaccgccaagctctccaactctcttcaaatgttcttgaccaa
tggattaactctgctactggaagccttgttcgctttgttcgccaggagatggaggcatat
cgattatacacggtggtaccgtatcttttgaaatttattgacaaccttacaaatatatat
gtgaggttcaaccgcaagagactgaagggacgtactggggaagaagactgtagaacatca
ctctcaacactttaccatgtgctcttaaccacctgcattgcaatggctccatttacacca
ttcttcacagaggctctctatcaaaatttaagaaaggcttttcattcatctgaggaaagc
attcactactgtagtttcccttctgctactgggaagatagaggagcgcattgaacaaagt
gttactaggatgatgactgtcattgatcttgctcgcaatatccgagagcgtcataataag
cctctcaaaacgccacttaaggagatgattgttgtccatcctgacgctggctttcttgag
gacattgccggaaaactaaaagagtatgtgatggaggaacttaatgtaaaatcagtggtt
ccatgcagtgatctattaaagtacgcgtctctgcgtgccgagcctgattttagtgtactt
ggtaaaagattgggaaaggctatgggattagttgccaaggaggtcaaagctatgtcacaa
gctgacatcttagcttttgagaagtctggtgaagttaccttttctgggaactgtttgaag
tcaactgatatcaaggtcttgcgggagttcaaacgtcctgctgatgttacagaaaaagaa
atagatgctgcaggagatggtgatgtcttggtgatcttggatttgcgagctgatgaatca
ctgtatgagtctggaattgctcgtgaggtcatcaacagaatccagaaattgcgcaagaaa
gctggcctggaacctactgatattgttgaggtttattatgaacctttgaacgatgacaag
catgttttgacgaatattgtgaaatcacaggagcaatacatcagggatgcactaggatct
cctttgcttcagcatactatggctcctgattatgctgttgtattgtgcggtgaggagttt
cagggagtatcaggactttcattttctatcaacatagcaaggcctgctccagtgtttgtt
tctgatgccattcttgatttatataatgggaacaaaaagctggctgaagatttggaaacg
tacttgttatctagggatcttttgaaactgaaatcaaagtttcaagttggaaacggcaag
atcaaagtaaattgcatcgtggatcatcctgcggttgagattgaagtggggaaacattta
tttctgagcgttggcgattacttcttgagcagagcagaaaattttcatcagtag
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