KEGG   Asparagus officinalis (garden asparagus): 109844953
Entry
109844953         CDS       T05243                                 
Name
(RefSeq) RING-box protein 1a
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
aof  Asparagus officinalis (garden asparagus)
Pathway
aof03420  Nucleotide excision repair
aof04120  Ubiquitin mediated proteolysis
aof04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:aof00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    109844953
   04120 Ubiquitin mediated proteolysis
    109844953
  09124 Replication and repair
   03420 Nucleotide excision repair
    109844953
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:aof04121]
    109844953
   03400 DNA repair and recombination proteins [BR:aof03400]
    109844953
Enzymes [BR:aof01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     109844953
Ubiquitin system [BR:aof04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   109844953
  Multi subunit type E3
   SCF complex
    Ring finger protein
     109844953
   Cul2 complex
     109844953
   Cul3 complex
     109844953
   Cul4 complex
     109844953
   Cul7 complex
     109844953
   Cul8 complex
     109844953
   Cul9 complex
     109844953
DNA repair and recombination proteins [BR:aof03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      109844953
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      109844953
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 zf-RING_16
Other DBs
NCBI-GeneID: 109844953
NCBI-ProteinID: XP_020269725
LinkDB
Position
6:complement(12334165..12347530)
AA seq 121 aa
MASLETDINMVPSGEGSSSAAVAGPSSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRN
HIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYG
H
NT seq 366 nt   +upstreamnt  +downstreamnt
atggcgtctctggagacggacatcaacatggttccctcgggcgagggctcgagctcggcc
gccgtcgcgggcccgtcgtcctcgacgaagaagccgaagcggttcgagatcaagaagtgg
aacgccgtcgctctctgggcctgggatattgtggtagacaactgcgcgatctgtaggaac
cacatcatggatctctgcattgagtgccaggcgaatcaggctagtgcaacgagcgaggag
tgtaccgttgcttggggagtgtgcaatcatgccttccactttcactgcattagtaggtgg
ctcaagacccggcaagtttgtcctttggataacagcgagtgggagttccagaaatatggc
cactag

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