Asparagus officinalis (garden asparagus): 109848277
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Entry
109848277 CDS
T05243
Name
(RefSeq) transcription factor PIF3-like
KO
K12126
phytochrome-interacting factor 3
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof04075
Plant hormone signal transduction
aof04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
109848277
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
109848277
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aof03000
]
109848277
Transcription factors [BR:
aof03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
109848277
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SSDB
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GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
109848277
NCBI-ProteinID:
XP_020273291
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Position
7:complement(31569470..31573413)
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AA seq
650 aa
AA seq
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MPLPEFHRAATKKLESSQSNIFTCTSDVPSFMPDNEFVELLWENGQIVMQGQSHRPKKSS
YPTPFPSSNLRAQDKYGKYPTIPKFGQFEGIDSTINELSPAVPCANIGLNAQDDMTPWIN
YPIEDPLCSEFFSELVGISSNPPTIERSNGCAAKDLHNAENGHSSRALRDGSDPSKIRGN
NLPQQCQGSVGNLKSRVTGFGAGGSGTSSTHHGHFQKPDLVSVSKPLAAGNGVGLMNFSQ
FSRPPSLVRANNKSVDRLKTNEKVSSATASTNPMESTLIESSGLRGNSGLNSHKVEVRSN
EKGKEDVVLAEQRTEAICNNKNNQSSSFAASVTVGRNEAEKGPEAVVASSVCSGNSAGAE
SNDPKHTAKRKNREGDESGYHSEDPDDDSTGLKKPSAGRGRTGTKRSRAAEVHNLSERRR
RDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQMMSMGSGLCMPPMMLPPG
MQHIRAPTMTHFSPMGVGMGMGMGLSYGMGMLDMNSSPNCPLIPVPSMHTSQFPCTSVGI
PGSAGLQLFGIPGHGQGLPVPLPRAPLFNPLSVPRAKGNSVNEVPGMIANPLQVSDSGPS
SMCKDQAQRETSKSESQANLVQISNQASHVTENATKNTINENGNASSRHN
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgcctctccctgaatttcatagggctgcaacgaaaaagcttgaatcttcacaatccaac
atattcacttgcacatctgatgtcccttccttcatgcctgataatgaatttgtggagctt
ctatgggaaaatggccagattgtgatgcaaggccaatcacatagaccaaagaagagctct
tatcctactcctttcccttcctccaacctcagagctcaggataaatatggcaaatatccc
acaatcccaaagtttggccagttcgagggtatcgattcgacgattaatgagctatctcct
gctgtgccttgtgccaatatagggttgaatgcccaagatgatatgaccccttggatcaat
tacccaattgaggatcctctttgctcagagttcttctctgagttggtcggcattagctca
aatccgccaaccatcgagaggagcaatgggtgtgctgctaaagacttgcataatgcagag
aacggtcatagctctagagctctcagagatggttcagaccctagtaagattaggggcaac
aatttgccgcagcaatgccagggttcggttgggaatctaaaatcgagagtgacaggtttt
ggtgctggcgggagtgggactagtagtactcaccatggccattttcagaagccagatttg
gtatcagtttcaaagcctttggcagcgggcaatggcgttggcttgatgaatttctctcaa
ttttcgaggcctccttcgctcgttagagctaataataagagcgtagatcggttgaaaaca
aatgagaaggtgtcttcggctactgccagtactaatcctatggaatcaacattgatcgaa
tctagtggattacgagggaattcaggtttgaattcgcacaaagtggaggtgagatcaaat
gaaaagggtaaagaggatgtagttttggccgaacagagaacagaggctatttgtaataat
aagaataatcagagctcaagctttgcagccagtgttacagtcggaagaaatgaggctgaa
aagggtcctgaagcagttgttgcttcttctgtgtgctcaggcaacagtgcaggggctgag
tcaaatgatccgaaacacacagcgaaaagaaaaaaccgagaaggagatgaatctgggtat
catagtgaagatcctgacgatgactcaactggtttaaaaaaaccgtctgcagggcgagga
cgtacagggacaaagcgaagtcgtgctgctgaagttcataatttgtcagaaagaaggcga
agagatagaataaatgagaaaatgcgcgcgttgcaggagcttatacccaattgcaacaag
gtggacaaagcttcaatgcttgacgaggccatcgagtaccttaaaacccttcagctacaa
gttcagatgatgtctatggggagtggactatgcatgcctcctatgatgttaccaccaggg
atgcaacatattcgtgcaccaaccatgactcatttctcgccaatgggtgtaggaatggga
atgggcatgggattgagttacggaatgggaatgctcgacatgaatagctccccaaattgc
ccattgattccagtaccatcgatgcacacgtcgcaattcccttgcacttcggttgggata
ccaggatctgcaggtcttcagttgttcggaatcccaggtcacgggcagggactccccgtg
ccattgcctcgtgcgccactcttcaatcctttgtctgtccctagagcaaaagggaactca
gtaaatgaagtaccaggaatgatagcaaatccattgcaagtttcagattcaggtccttca
tcaatgtgcaaagatcaagcacagcgagaaacaagcaaaagcgagtcgcaggcaaacttg
gtgcaaatcagtaaccaagcatcgcatgtcactgaaaatgcaacaaaaaacactataaat
gaaaatgggaatgcgtcaagtagacataactag
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