Anastrepha obliqua (West Indian fruit fly): 129236396
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Entry
129236396 CDS
T09777
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
aoq
Anastrepha obliqua (West Indian fruit fly)
Pathway
aoq03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aoq00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129236396
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aoq03041
]
129236396
Spliceosome [BR:
aoq03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
129236396
Complex C
U5 SnRNP specific factors
129236396
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
MMR_HSR1
EFL1
Roc
Septin
Ras
TniB
EF-G_D2
Motif
Other DBs
NCBI-GeneID:
129236396
NCBI-ProteinID:
XP_054726738
LinkDB
All DBs
Position
1:complement(146350168..146367713)
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AA seq
974 aa
AA seq
DB search
MDSDLYDEFGNYIGPELDSDEDDDQSIYGQQEPQDDQDDDAMDEEEEHQDDEDKEVTAVV
LHEDKRYYPTAVEVYGPDVETIVQEEDAQPLDKPLIEPIKKLKFQIKEQELPETTYDMEF
MADLMDTPPLIRNVALVGHLHHGKTTFVDCLIRQTHPQFEQAEERTLRYTDTLFTEQERG
CSIKATPVTLVLQDVKQKSFLMNVFDTPGHVNFSDEVTAAMRMCDGIVLFVDAAEGVMLN
TERLLKHAVQEKMAITVCINKIDRLVLELKLPPQDAYFKLKHIVEETNALLSTYGANDNL
LVSPALGNVCFASSLYGFCFTLKSFAKLYADTYEGVNYVEFAKHLWGDMYFHSKSRKFTK
KPPHNSAQRSFVEFILEPMYKVIAQVVGDVDTTLSDTLAELNVRITKEEMKSNIRPLLRL
VCNRFMGDFNGFVDMCVEHIRSPLDNAKRKVDHIYTGPKEGNIYKDMMECNQNGTLMVHS
AKMYPTDDCTFFQVMARVISGTLHAGQEVRVLGENYTLQDEEDSRVLQVGRLWVYEARYK
VELNRVPAGNWVLIEGIDQCIVKTSTIVDINAPEDLFIFRPLKFNTQSIIKIAVEPVNPS
ELPKMLDGLRKANKSYPLLSTRVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADP
VVAFCETVVETSSLKCFAETPNKKNKITMISEPLEKGLAEDIENEVVSINWNKKRLGEFF
QVNYDWDLLAARSIWAFGPDTTGPNILVDDTLPSEVDKNLLTSVKDSIVQGFQWGTREGP
LCEEPIRNVKFKILDAVIAGEALHRGGGQVIPTARRVAYSAFLMATPRLMEPYLFVEVQA
PADCVSAVYTVLARRRGHVTQDAPVSGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFCL
SVFHHWQIVPGDPLDKSIVIRPLEPQQASHLAREFMIKTRRRKGLSEDVSINKFFDDPML
LELARQDVLLNYPL
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atggattctgacttatatgatgagttcggtaactatattggacctgaattggatagcgat
gaagatgacgaccaaagtatctacggacaacaagagccgcaggatgatcaagatgatgat
gcaatggatgaggaggaggaacatcaagacgatgaagataaagaagtgacagcggtggtg
ctacatgaagataaacgttactacccgactgcggtcgaagtgtatgggccagatgtagaa
actattgtacaagaagaagatgcacaaccactagataagccacttattgaacctattaaa
aagcttaaatttcaaataaaagagcaagagttgccagaaaccacttacgatatggaattt
atggcagatttgatggatacaccgccacttatacgtaatgtggcgttagtaggtcatttg
catcatggaaaaacaacgtttgtcgactgcttaatacgtcagacacatccacaatttgag
caggcggaagaacgtacactgcgatacacggatacacttttcacagaacaggagcgcggt
tgtagtattaaagccacacctgttacgcttgtactacaggatgtcaagcaaaaaagcttt
ctgatgaatgttttcgatacgcctggtcatgtgaacttctcagacgaagtaacagcggcc
atgcgcatgtgtgacggtattgtgctatttgtagatgcggcagaaggtgtaatgttgaat
acggaacgtttgctgaagcatgcggtgcaagagaaaatggccattaccgtttgcattaat
aagattgatcgcctagtcttggagttgaaacttccaccacaagatgcttattttaaactg
aaacatattgttgaggaaactaatgccctactgagcacttatggtgcaaatgacaatttg
ctagtgtctcctgccctgggtaacgtttgtttcgcaagctcactatatggtttctgcttt
accttgaaatcgttcgccaaactatatgcagacacttacgaaggcgttaactacgtagag
tttgccaaacatttgtggggtgacatgtatttccacagcaaatctcgaaaattcacgaag
aagccaccacacaactcggctcagcgcagtttcgttgaatttattttggaacccatgtat
aaggtcattgctcaagttgttggcgatgttgatactacactctctgataccttagccgag
ctgaatgtgcgcataaccaaagaggaaatgaaatccaatatacgtccactcttacgtctt
gtttgcaatcgctttatgggtgatttcaatggttttgtcgatatgtgtgtagagcacatt
agatcgccactggataatgctaaacgtaaagtggatcacatctatacaggaccgaaagag
gggaacatttacaaagatatgatggaatgcaatcagaatggcacattaatggttcacagc
gccaaaatgtaccccacagatgactgcacctttttccaggtaatggctcgtgtaatttcg
ggtaccttgcatgccggtcaagaagtacgtgttttgggtgaaaattacacattgcaagat
gaagaagattcgcgtgttctacaagtaggccgtctatgggtgtacgaagcgcgttataaa
gtggaattgaatcgtgtgccggccggcaattgggtactaattgagggtatcgatcaatgt
atagtcaaaacgtcaacaattgtggacataaatgcgcccgaagatttatttattttccgc
cctttgaaattcaacactcagagcattataaaaatcgccgtagagccggttaacccctcc
gaattacccaagatgttggatggcttgcgtaaagctaataaatcctatccgttgctatcg
acacgtgtagaagaatctggtgaacatgttattttgggtaccggcgaactctacttggac
tgtgttatgcacgatttgcgaaaaatgtattccgaaatagacattaaagtcgccgatcca
gtggtggcattctgcgaaaccgtagtagaaaccagttcattgaaatgttttgcggaaacg
ccaaataagaagaataaaattactatgatttctgagccgctggagaagggactggcagaa
gacattgaaaacgaagtagtctcgattaactggaataagaagcgactcggtgagttcttc
caagtcaattacgattgggatttgctcgcagcgcgttccatttgggcattcggcccggat
acaaccggaccaaatattttggtcgacgatacactgccttcagaagtagataagaacttg
ctgacttcagtgaaagattcgatagtgcaaggcttccagtggggcacacgtgaggggcca
ctatgtgaagaacctatacgtaatgtgaaatttaaaatattagacgcagtaatagcaggt
gaagcactacatcgtggtggtggacaagttatacccacagctcgtcgtgtcgcatactcg
gcatttcttatggcaacgccgcgtttgatggaaccttatttgttcgtagaggtgcaggcg
ccagccgattgtgtgtcggccgtgtacacagtgctagcacgaagaaggggtcatgtgaca
caggatgcaccggtttctggctcacctttatataccataaaagcatttatacccgccatc
gattcgtttggtttcgagaccgatttgcgtacacacacacaaggacaagcgttctgcttg
tcggtgtttcatcattggcaaattgtgcccggcgatccgttggataaatctatagtaata
aggccactggaaccgcagcaagcatctcatctagcgcgtgaatttatgattaagacgagg
cgtcgaaagggtttgtcggaagacgtctctattaacaaattcttcgatgatcctatgtta
ttggaattagcgcggcaagacgttttgctcaactatccactataa
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