Aspergillus oryzae: AO090003000966
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Entry
AO090003000966 CDS
T01018
Name
(RefSeq) unnamed protein product; mRNA splicing factor ATP-dependent RNA helicase
KO
K12815
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16 [EC:
5.6.2.6
]
Organism
aor
Aspergillus oryzae
Pathway
aor03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aor00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
AO090003000966
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aor03041
]
AO090003000966
Enzymes [BR:
aor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
AO090003000966
Spliceosome [BR:
aor03041
]
Complex C
Other components
Step II factors
AO090003000966
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
HA2_N
DEAD
AAA_22
AAA_19
T2SSE
SRP54
nSTAND3
ResIII
AAA_16
Flavi_DEAD
ATPase
AAA_14
SLFN-g3_helicase
AAA_30
ABC_tran
AAA_24
NACHT
AAA_7
Motif
Other DBs
NCBI-GeneID:
5992062
NCBI-ProteinID:
XP_023090164
UniProt:
Q2UK38
LinkDB
All DBs
Position
2:4707152..4712301
Genome browser
AA seq
994 aa
AA seq
DB search
MRNDRRNISIYTIPVLRSKPPLMALPNQGHRLVRRSRKTNECYNRPGLRAGNRRPFAKFS
TPFGAPQFGKYCYNSTSSYIFTMASNDMPPAKRLKSSNLPPPLRDAKRKDIDNWETNRML
TSGVAQRRDFDGDFMPEDDEGTRVHLLVHDLRPPFLDGRTIFTKQLEPISAVRDPQSDMA
VFSRKGSKVVRERRQQRERQKQAQEATTMAGTALGNLMGVKEDEGDSAVALPVEETYKHG
NKFAKHLKKDEGGQSSFSKSKTLREQREYLPAFAVREDLLRVIRDNQVIVVVGETGSGKT
TQLTQFLHEDGYSKFGMIGCTQPRRVAAMSVAKRVSEEMEVDLGDLVGYAIRFEDCTTDQ
TVIKYMTDGVLLRESLAQPDLDKYSCIIMDEAHERALNTDVLMGLLKKVLARRRDLKLIV
TSATMNAERFSRFFGGAPEFIIPGRTFPVDVHFSRTPCEDYVDSAVKQVLAIHVSQGPGD
ILVFMTGQEDIEATCELVDERLKLLNDPPKLSILPIYSQMPAEQQAKIFEKAAPGVRKVI
VATNIAETSLTVDGIMYVVDAGFSKLKVYNPRMGMDTLQITPISQANANQRSGRAGRTGP
GKAYRLYTEVAYKNELYIQTIPEIQRTSLSNTVLLLKSLGVKDLLDFDFMDPPPQETIST
SLFELWSLGALDNLGDLTPLGRQMTPFPMDPPLAKLLITAAENYECSEEMLTIVSMLSVP
SVFYRPKERMEESDAAREKFFVPESDHLTLLHVYTQWRTNGYSDGWCIKHFLHSKALRRA
KEVREQLHDIMTVQKMPLVSCGTDWDVIRKCICSGFYHQAAKVKGIGEFINLRTSVTMQL
HPTSALYGLGYVPEYVVYHELILTSKEYMSTVTAVDPHWLAELGGVFYSVKEKGYSQRER
RVTELEFNRRMEIETQIAADRERAAAEKQREIERNDPSRRKKEVEVGGSAVRRPVITGKK
VGGVTASSTSRNGSGGGGSVVKKPQVKRRPGRAF
NT seq
2985 nt
NT seq
+upstream
nt +downstream
nt
atgaggaacgatagaaggaatatctcaatctacactattcctgtacttcgaagcaagcca
cctctcatggcacttccgaaccaagggcatcgtctggttcggcgtagcaggaaaaccaac
gaatgctacaacaggcctgggcttcgggcaggcaaccggcggccctttgcgaaattttcg
acacctttcggggcccctcaattcggtaaatattgttataactcgacatcgagttacatc
ttcacaatggcaagcaacgacatgcccccagccaaacggctgaaaagctccaacctaccg
ccaccgcttcgcgacgcgaagcgcaaagacatcgacaactgggaaacgaaccgaatgctc
acatctggagtcgcccaacgacgagacttcgatggggatttcatgcccgaagatgatgag
ggtactcgtgtacacttgctcgtccatgacctccgcccgcctttcctcgatggccgcacg
atctttaccaagcagctggagcccatttcagccgtacgtgatccgcagagtgatatggct
gtattcagtcggaaaggaagcaaggtcgtgcgggagcgtcgtcaacagagagagcgacag
aaacaagcgcaagaggcgacgacaatggcgggaacggcacttgggaatctgatgggggtc
aaggaagacgaaggtgacagtgctgtcgcgctacctgtggaggaaacatacaaacatggt
aataagtttgcaaagcatttgaagaaagatgagggtggtcagagttcatttagcaagagc
aagacgcttcgcgaacagagagaatacttgccggctttcgccgtgagagaagacttatta
cgagtcatacgggataaccaggtgattgtggttgttggtgagacaggttcgggaaaaaca
acccaattgacgcagttcctacacgaagacggctattcgaagttcggcatgatcggttgc
acacagcctcgtcgagtggcggccatgagtgtcgcaaagcgtgttagtgaggaaatggag
gtcgatttgggtgacctggtcggttatgctattcgatttgaagactgtacgaccgatcag
acggtcatcaagtatatgaccgatggtgttctactacgagagtcgctagcccaacctgac
ctcgacaaatattcatgcatcatcatggatgaggcacacgaaagagctctgaataccgac
gtgctgatggggcttctgaaaaaggtattagctcggagaagggacctgaagttgatcgtc
acctcagccacgatgaatgcagaacgcttttcaagattctttggtggtgccccagagttt
attatccctggaaggacattcccggtagatgtccacttctcccgtacaccctgtgaggat
tacgtcgatagtgcggtcaagcaggtcttggccatccacgtttctcaaggtcccggcgat
atccttgtcttcatgacgggccaagaggatatcgaggcgacttgcgagttagtcgatgag
cggttgaagttgttgaatgacccaccgaagcttagcatattacccatttacagtcaaatg
ccggcagaacaacaggcgaagattttcgaaaaagcggccccaggcgtacggaaggtgatc
gttgccacgaacattgctgaaaccagcttgacggtggacggtatcatgtatgtcgttgac
gccggtttctcgaagctgaaagtctacaatccccgaatgggtatggatacactgcagatc
acgccgatctcacaggccaatgccaaccagcgttccgggcgtgcgggacggacagggcct
ggcaaagcttaccgtctctacaccgaggtggcatacaagaatgagttgtatatacagact
atacctgaaatccagcgtaccagcttgtccaacacggttcttcttctcaagtctcttggg
gtcaaggaccttttagacttcgacttcatggatccgccgccacaggaaaccatctcaacg
tcactcttcgagctctggtctttgggtgcgctggataacctcggtgatctcacgccgttg
ggacgtcagatgacaccattccccatggacccaccgctcgccaagcttctcataacggcc
gccgagaactacgagtgcagtgaggaaatgctgaccattgtatctatgttgtctgtgccg
agtgtcttctaccgtcccaaagagcgcatggaagagtcggatgcagcccgtgagaaattc
ttcgtccccgaatcagaccacttgacgctgctccatgtttatacccaatggagaaccaat
ggctattcagatggctggtgtatcaaacattttcttcactcgaaggccctgcggcgagcc
aaggaagtccgcgaacaacttcatgacatcatgaccgtgcagaagatgccgctcgtcagc
tgcggaacagactgggatgtgatccgtaaatgcatttgctctggattctaccatcaagct
gcgaaggtgaagggtatcggcgagttcatcaatctgcggaccagtgtgaccatgcagttg
catccaaccagcgcgctgtacggtctgggatatgtgcccgagtatgtggtctaccatgaa
ttgattttaaccagcaaggagtacatgtccactgtcactgccgtggatcctcactggctc
gctgaactcggaggcgtcttctactctgtcaaagaaaaaggatactcgcagcgggaacgc
cgcgtaacagaacttgaattcaatcgccgcatggagatcgagactcagatcgccgcagac
cgtgaacgggctgcagcagagaagcagagagaaatcgagcggaacgacccatcaagacgg
aagaaagaagtcgaggtggggggttctgccgtgcgacgtccagtcatcaccggcaaaaag
gttggcggtgtcacagcatcgtccacatcgcggaatggctctggtggtggtggcagcgtg
gtcaagaaaccacaggtgaagagacgacccggacgagcattttag
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