Aspergillus oryzae: AO090003001052
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Entry
AO090003001052 CDS
T01018
Name
(RefSeq) unnamed protein product; RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH, subunit TFB1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
aor
Aspergillus oryzae
Pathway
aor03022
Basal transcription factors
aor03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
aor00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
AO090003001052
09124 Replication and repair
03420 Nucleotide excision repair
AO090003001052
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aor03021
]
AO090003001052
03400 DNA repair and recombination proteins [BR:
aor03400
]
AO090003001052
Transcription machinery [BR:
aor03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
AO090003001052
DNA repair and recombination proteins [BR:
aor03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
AO090003001052
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_TFIIH
BSD
DUF5357
Motif
Other DBs
NCBI-GeneID:
5992139
NCBI-ProteinID:
XP_001820156
UniProt:
Q2UJW1
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All DBs
Position
2:4920047..4922048
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AA seq
629 aa
AA seq
DB search
MAPPSGSAAYKKKDGTLTMSQDRQSISWIPAAGGATGTITLSVSQITNLQQTPASNPKVM
LKIFVLPPDAPDNSPEQYVFNFTAGANARAEADAIKDALSAAIQAAKTAQAAPTPSPAPG
AGEGMSTAMAFASAVSSKSTWDNDKWLKGDVELQQSLLKSDPNLQRMFMESLHTKPDTLT
AGQFMSQFWSTRIHLLRAHAIERSQTRGSYNVLSTLKPRVEDNVTKLNISKEQIQLIFNQ
HPLVRRVYDENVPKLSEAQFWSRFFQSRLFKKLRGERLSETDATDAILDKYLQADEHGNL
PREAHVPHFLNLEGNEVNNSQRRGNRPDLDMRWSAPDKVPIIRTLNSLSEKIMANVAPAD
GDPHAPVGMDEDTYNELQLRDLRGDEEADRVLLNIRDQSRFFSAQAKDSEDEQNRLFAQQ
DPEKILSDLRREIEQNLPDDGTAPLGRLVEPDELGDEKESNQQPGSRVSLQKSSAQIIAA
IRDRRAQTDVSSTTGTYGLSSGLYDRLNLTHATTTEFLHQFWQAFLSGNPDRAAELSSLV
DSLSRAMERIKAVAQDAEAERQVEVDRKKRHAREVMEATGKKPRLNLSSIQGGEKVVNQL
MGPTIQALETAQAKYKAALAEEMKEASAQ
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atggcacctccgagcgggtcggcggcatacaagaagaaagatggcaccctgaccatgtcc
caggatcgccagtcgatctcttggatcccggcggctggtggtgcgacgggaacgatcacg
ctgtctgtttcccagattacgaatctacaacagaccccagcaagtaacccaaaagtcatg
ttgaagatctttgtccttcccccagatgcgccagataattctcccgagcagtacgtcttc
aactttaccgctggagccaacgcgcgtgcggaagcggacgctattaaagatgcactcagc
gcggccatccaggcagcaaaaacggcacaagctgcgcctacaccgtctcctgcccctggc
gcgggcgaaggtatgtctacggccatggcgtttgcaagtgccgtttcgtccaagagcacc
tgggataacgacaaatggctaaagggcgatgtggagctacaacagtcattactcaagtcg
gatccgaacctgcagcgcatgttcatggagtcgctgcataccaagccggataccttgacc
gcgggccaattcatgtcgcaattttggtcgacccgtattcatcttctgcgcgctcatgcc
attgaacggtcgcagacgagaggttcttacaatgtgctatcaacgctgaaaccgcgcgtg
gaagataatgtgaccaagttaaatatcagcaaagagcagattcagttgattttcaaccag
caccctctcgttaggcgtgtgtatgatgagaacgtacccaagttgagcgaggcacagttc
tggtcccggttcttccagagtcgattgttcaagaaattacgcggagagcggctttcggaa
actgatgccaccgatgccattctggacaaatatctgcaggcggatgagcacggtaatctc
ccacgggaagcgcatgttccgcattttcttaacctagagggcaatgaggtgaataatagt
cagcgccggggaaatcgacctgacctcgacatgaggtggtctgcaccggacaaggtgccc
atcatccgaaccttgaacagcttaagtgagaagatcatggcgaatgtcgcaccggctgat
ggtgatccgcatgcaccagtcggtatggatgaggatacatataacgaattacaactacgc
gacctgcgcggtgatgaggaggcggaccgcgtcctgttaaatattcgagaccaaagccgg
tttttctccgcccaagccaaggactccgaagacgaacaaaacaggctgttcgctcagcaa
gatccggaaaagattctaagtgacctacgcagggaaattgaacagaatctacctgacgat
ggtaccgcgccgctgggcagacttgtcgagccggacgaactcggtgacgagaaggaaagc
aaccaacagccggggtctagagtcagtctgcagaagtcttcggctcagatcattgccgcg
attcgggatcgtcgagcccagacggatgtgtcctccactactggcacatacggtctgtcg
agcggcctctacgaccggttaaacttgacgcatgctactacgacggagtttctgcaccag
ttttggcaggcgttcctatcaggtaaccctgatcgtgcggcagaattatcatccttggtc
gactcgttgagtcgggccatggagcgaattaaagcagtagcacaggatgcagaggcagag
cgacaggtggaggtagatcggaagaagcgtcatgcgcgagaggtcatggaggccactggc
aagaagcctcgactcaatctgtcaagcatacaaggtggtgaaaaggtggtcaaccaactg
atgggacccactattcaagcactagaaacagcgcaggcgaagtataaggcagcgttggcg
gaagagatgaaggaggcatccgcgcaatga
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