Aspergillus oryzae: AO090005000813
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Entry
AO090005000813 CDS
T01018
Name
(RefSeq) unnamed protein product; polyadenylation factor I complex, subunit, Yth1 (CPSF subunit)
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
aor
Aspergillus oryzae
Pathway
aor03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aor00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
AO090005000813
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aor03021
]
AO090005000813
03019 Messenger RNA biogenesis [BR:
aor03019
]
AO090005000813
Transcription machinery [BR:
aor03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
AO090005000813
Messenger RNA biogenesis [BR:
aor03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
AO090005000813
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_2
zf-CCCH_4
zf-CCCH_9
Motif
Other DBs
NCBI-GeneID:
5989776
NCBI-ProteinID:
XP_001817831
UniProt:
Q2URI6
LinkDB
All DBs
Position
1:4240688..4241455
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AA seq
255 aa
AA seq
DB search
MSAEVSHAASQILASGSERDPSYNDFSFIPFLRNSFGFGLACDVPVCKAYSEGHCPLGPA
CPDRHPTPSRVTTSTTTASGLAPSTTHGSLVCKHFLKGLCKKGLKCEYLHEYNLRRMPEC
QSFSRSGYCPNGDDCLYQHVREQARLPPCEHYDRGFCPLGPLCAKRHVRRRLCQYYLAGF
CPEGKGCADAHARWIENLPKPSIRVEKTEEELERERILIREEQEREKEREREWRSERGRG
GGFMRGRFRGRGRGL
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcagaagttagtcacgctgcatcacaaatcctagcttccggcagcgagcgcgac
ccaagctataacgatttctccttcatccccttcctacgcaatagcttcggcttcggactc
gcctgcgatgtacccgtctgcaaggcgtacagtgaaggccattgtcccttagggcctgct
tgccccgatcgacatccgacaccatcccgagtgacgacgtccacgactaccgcttccgga
ctggcaccgtccacgacgcacgggtcactcgtctgcaagcacttcctcaaggggctgtgc
aaaaaaggcctcaaatgtgaatatctccatgaatacaaccttcgccggatgccagagtgc
cagtccttttcgcggtcaggctactgtccgaatggtgatgactgtctttatcagcacgtg
cgggagcaggctcgattaccgccatgcgagcactacgatcgaggcttttgcccattgggg
ccgctctgtgccaaacgtcatgtgcgccgacggctgtgtcagtactacctggcagggttc
tgtccagagggtaaaggttgcgcggacgctcatgcccggtggatcgagaacctccctaag
ccgtcaatcagggtggagaagacagaggaggaattggagcgagagaggatattaatcagg
gaggagcaggaaagagaaaaggaacgagaacgtgaatggaggagtgagcggggacgcggg
ggtggatttatgcgtggtcgttttagaggccggggacgtgggctgtga
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