Aspergillus oryzae: AO090005001001
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Entry
AO090005001001 CDS
T01018
Name
(RefSeq) unnamed protein product; mRNA cleavage and polyadenylation factor II complex, BRR5 (CPSF subunit)
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
aor
Aspergillus oryzae
Pathway
aor03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aor00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
AO090005001001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aor03021
]
AO090005001001
03019 Messenger RNA biogenesis [BR:
aor03019
]
AO090005001001
Transcription machinery [BR:
aor03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
AO090005001001
Messenger RNA biogenesis [BR:
aor03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
AO090005001001
U7-dependent histone pre-mRNA processing factors
AO090005001001
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B
Lactamase_B_6
Anti-Pycsar_Apyc1
RMMBL
Lactamase_B_2
Lactamase_B_3
Motif
Other DBs
NCBI-GeneID:
5989938
NCBI-ProteinID:
XP_001817993
UniProt:
Q2UR24
LinkDB
All DBs
Position
1:<3748696..>3751802
Genome browser
AA seq
870 aa
AA seq
DB search
MATKRKASALNASVDDEPVDPSDELGFYCLGGGNEVGRSCHIIQYKGKTVMLDAGMHPAK
EGFSALPFFDEFDLSTVDILLISHFHVDHSSALPYVLSKTNFKGRVFMTHATKAIYKWLI
QDNVRVSNTASSSDQRTTLYTEHDHLSTLPLIETIDFNTTHTINSIRITPFPAGHVLGAA
MFLISIAGLNILFTGDYSREEDRHLIPAEVPKGIKIDVLITESTFGISSNPPRLEREAAL
MKSITGVLNRGGRVLMPVFALGRAQELLLILDEYWEKHPELQKVPIYYIGNTARRCMVVY
QTYIGAMNDNIKRLFRQRMAEAEASGDKSISAGPWDFRFVRSLRSLERFDDVGGCVMLAS
PGMLQTGTSRELLERWAPNERNGVVMTGYSVEGTMAKQLLNEPEQIPAVMSRAASGLARR
GGNDEEQKVMIPRRCTVDEISFAAHVDGVENRNFIEEVSAPVVILVHGEKHQMMRLKSKL
LSLNAEKTVKVKVYTPANCEEVRIPFKKDKIAKVVGKLAQIAPPSEQDDGHLMAGVLVQN
GFNLSLMAPDDLREYAGLTTTTITCKQHITLSSASMDLIKWALEGTFGAIEEIGPKTDVK
EELVENEKVSKEISKLKEEAADEEIPIENEQAYLVMGCVVIRYFPRTREVELEWEGNMMN
DGVADAVMAVLLTVESSPASVKQSAKQKHHHHHHQDTLELPNPHSQLGSEERFARLLMML
EAQFGSDISPIERPRLPTTQLTNGAAKNETSAQLSAAEQTLKEEEEDDDESLAELEAAEL
ARLHALGIPVPGIEIRVDKHIARVWLEDLEVECANAVMRDRVRVVIERAVETVASMWAEG
PPPATVTNGETKEKLKDVLASNGAEIDATA
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atggcgacaaaacgaaaagcatcggctttgaatgcctcggtcgacgatgagcctgtcgat
ccgtcagacgagctggggttctactgtctaggtggagggaacgaggttggccgatcatgt
cacattattcagtataaggggaaaacagtgatgcttgacgccggtatgcatcctgcgaaa
gagggattctctgctcttccgttcttcgacgagttcgacttgagcacagtggatatcctt
ctgattagccattttcacgttgatcattcctccgctctcccttatgtcctcagcaagacg
aacttcaaaggccgtgtctttatgacgcatgcgaccaaggctatctacaaatggctcatt
caggacaatgtacgggtcagcaacacagcatcttcgtccgatcaacgtaccactctttat
accgaacatgaccacctgtctacacttcctctgattgaaaccatcgatttcaatacgaca
cacacaatcaatagcatccgtattactcctttccctgccggccatgtccttggtgccgct
atgttcttgatttcaatagctggcttgaatattctctttactggagattactcacgtgaa
gaagaccgacacttgattccagctgaagtgccaaaagggataaagatcgatgtacttatc
acggagtcgacatttggaatctcatccaacccacctcgtttggaacgagaagctgctctt
atgaagtcaatcactggggtcttgaaccgaggtggtagagtcctaatgcctgtgtttgct
cttggtcgtgcccaagagttgctacttattcttgatgaatactgggagaagcatcctgaa
ctgcagaaagtgcctatatactacattggaaatacggcccggagatgcatggttgtgtat
cagacatatatcggcgcaatgaatgacaacatcaagcgactctttcggcagcgtatggcg
gaggcagaagctagcggtgataagagtatcagcgctgggccctgggacttcagattcgtt
aggagtttgcgaagcctggagcgtttcgatgatgtagggggttgcgtgatgctagcttcc
ccgggtatgctacaaactggtacaagcagagaactccttgagcgttgggccccaaatgaa
cgcaacggtgttgttatgaccggttacagtgttgagggtacaatggccaagcagctactt
aatgagcccgagcaaattccagccgtcatgtcacgagcagcgtctgggctggcaagaagg
ggcggcaatgatgaagaacagaaagtcatgattccaaggagatgtactgtggatgaaatc
agcttcgcagctcatgttgatggcgttgaaaatcgcaacttcattgaagaagtttctgcc
cctgttgtgatcctcgttcatggcgaaaaacatcagatgatgcgactgaagtccaagctt
cttagtctcaatgcggagaagactgtaaaggtcaaggtatatacaccagcaaactgtgaa
gaagtccgtatccctttcaagaaggacaaaatcgcgaaagtcgtcggaaagctggcccaa
atcgcgcctccttcggagcaagacgatggccacctcatggccggtgttctcgttcaaaac
ggattcaacctatcattgatggcacccgatgatctacgcgaatatgccggtctaactacg
acaactatcacttgcaagcaacatataaccctcagctcggcgagtatggacctgatcaaa
tgggcgctcgagggcactttcggtgctatcgaggaaattggtccgaagaccgacgtcaag
gaggagctcgtggagaacgagaaggtttccaaggaaatatccaaactcaaggaggaggct
gccgatgaagaaattcctatcgaaaatgaacaggcctatcttgttatgggttgtgtagtc
attcgctatttccctcgtactcgcgaggtcgagctcgagtgggaaggaaacatgatgaat
gatggggttgccgatgctgtcatggcagtcctgctcactgtcgaaagcagccctgcatct
gtgaagcaatccgccaagcaaaagcaccaccaccaccaccatcaggacactctcgaactt
cctaaccctcattcacagctaggttctgaagaacggttcgcacgccttctcatgatgctt
gaggcacagttcggatcggacatatcacccattgagcgtccgcgactacccactactcaa
cttaccaacggggcagcgaagaacgaaacgtcggcgcaattgagtgctgcggagcagact
ctcaaagaagaagaggaagacgatgacgaaagtctagctgaactggaagccgccgaactt
gcgcgactccacgctctaggaattccggtacccggaattgagatcagagttgacaagcac
attgcgcgggtatggctcgaggatcttgaagtcgagtgtgccaatgccgtaatgagagac
agggttcgagtggtcatcgaacgtgcggtggaaacagttgctagcatgtgggctgagggc
cctccacctgctactgtaacaaacggtgaaaccaaggagaagctgaaagatgtacttgct
tccaatggtgctgagattgatgcaactgcctaa
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