Aspergillus oryzae: AO090005001258
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Entry
AO090005001258 CDS
T01018
Name
(RefSeq) exosome component 3'-5' exonuclease
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
aor
Aspergillus oryzae
Pathway
aor03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aor00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AO090005001258
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aor03019
]
AO090005001258
Messenger RNA biogenesis [BR:
aor03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
AO090005001258
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
PMC2NT
HRDC
DUF6987
Motif
Other DBs
NCBI-GeneID:
5990147
NCBI-ProteinID:
XP_001818202
UniProt:
Q2UQG5
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All DBs
Position
1:3077610..3079892
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AA seq
760 aa
AA seq
DB search
MDSAADFPPFQQQLTSSLVQMTRTVGQLSAEDLSFHRTSSAELSESIDEQSGRILSLTSS
LLKAATAGTDLPVPTLQDEDSIEDNWRGVVDVIDALLERADACLDEFTGVIKRLSPSQQE
QSAAKATKKTTSKFPTIYDYGPSKIPKPQLYFERQVDNADDSPFKPLLRTKPHAVVPLEK
SVESSDRNPYETEIRAARYPESTYAVSSPVPYQPWESTTATFVDTLEGVKEMLEELKSAK
EIAIDLEHHDVHSYQGLVSLMQISTRDKDWVVDTLKPWREELQMLNEVFADPSILKVFHG
SSMDIIWLQRDLGLYVVGMFDTYHAACALNYPKRSLKFLLQKFVNFEADKRYQMADWRIR
PIPEGMFDYARSDTHYLLHIFDHLRNELIENSTPENNLIDYVLEKSKDEALQRFERSPYD
AATGQGPGGWYDYLSRNPAVLSKEQFAVFKAVHQWRDAVAREEDEGVQCVFPKHVLFKVA
HAMPLDLGTLFRTLSPVTPIAKDRAADLLAVIKNAKIEGADGPEWRDVYVKPTRAGRSVP
ATETEQGLVTPPIGEENFPTAARCEVSQFWGAVLDTREPLTPPEYSAVASAEALRLSLPL
PPMPRTVSEARDKLAGSAAKPAPPKPTPAPVEMPEEKEENKIFTVKGLGGPRKRKSEEAP
SPEGDDSSDVIHIGEKPSKKQRRKEKKNKSASQTPQPEEKKEEAEPFNYEAADSVLHAQP
AQTATLHKKRPFNPYKKALEAPSGVRKQKRETPGKSFTFR
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atggattccgcagcagacttcccgccgttccagcagcagctaacgtcgtcgctcgtgcag
atgacgcgcactgttggccagctctctgctgaagatctcagttttcatcgcacttcaagc
gcggagctttccgagtccatcgatgaacaaagcggcaggattctttcattaacttcttca
cttttgaaagccgccacagccggtaccgatttacccgtgccgaccttgcaggatgaagac
tccatcgaagacaattggcgcggtgtggtggatgttatcgatgctcttttggaaagagca
gatgcttgtttggatgaatttaccggtgtgattaagagactgagcccatcgcagcaagaa
cagagtgcagccaaggctaccaagaagaccacttcgaagtttcccaccatctacgattac
ggcccgtcgaagatcccgaaacctcagctgtattttgagcgtcaagtcgataacgccgat
gattcgcctttcaagccattgctcaggactaagccacatgcggtggttccgttggagaag
tctgttgaatcgtcggaccgaaacccttacgagaccgagatccgcgccgcaaggtatccg
gagtctacctacgctgtgtcatctcccgttccttaccagccttgggagtcgacaaccgca
actttcgtggataccctagaaggagtgaaggaaatgttggaagagctcaaatctgcgaag
gagatcgctatcgatctagagcatcacgatgtgcattcctatcagggtcttgtttctttg
atgcagatcagcacccgcgataaggactgggtggttgacacgctgaaaccgtggagggag
gagcttcagatgcttaatgaggtctttgcggatcctagcatcctcaaagtgttccacggt
tcgtccatggatatcatttggctccaacgcgatctaggtctctacgtagtcggcatgttt
gatacctaccacgccgcctgcgctctgaattaccccaagcggagtttgaagtttcttctg
caaaagtttgtcaacttcgaagccgacaagagataccaaatggccgactggcgaattcgg
ccgattccagagggcatgttcgactacgccagatccgatacccattaccttcttcacatt
ttcgatcacttacgcaacgaactcatagagaactcaacgcccgaaaacaaccttatcgac
tacgtcttggagaagtcaaaggatgaagctctgcaacggtttgaacgctctccttatgat
gctgccacaggccaaggaccaggtggctggtacgactacttatcgcgcaatcctgcggtc
ctgtctaaggagcaatttgccgtcttcaaagcagttcatcaatggcgtgatgcagttgcg
agagaggaggacgaaggcgtgcagtgtgtgttccctaagcacgtccttttcaaggttgcg
cacgctatgcctttggatctggggacattgttccggacactgtcaccagtgacacccatc
gccaaggacagagccgcggacctcctggcggtcatcaaaaatgcaaagatcgaaggcgct
gacggccctgaatggcgtgatgtgtatgtgaagccgacaagagcgggacgatctgttccg
gcgacggaaaccgaacagggtcttgtgacgccacctatcggtgaggagaacttccctacc
gctgcgcgctgcgaggtttcccagttctggggtgcagtgttggacacccgggaacctctt
acccctcccgagtactctgccgtcgcctctgcagaagcccttcgactatcgctcccgctg
ccacccatgcctcgtacggtatctgaagctcgcgacaagcttgctggctctgctgccaag
cctgcgccccccaaacccaccccagctcctgttgaaatgccagaagaaaaggaggagaac
aagatcttcacggtcaaagggcttggtggcccgcgcaaacggaagagcgaagaagctccg
tcgccagagggtgacgattctagcgatgtgatacacatcggggagaaaccgtctaagaaa
caacgccggaaggaaaagaagaacaaatccgcgtcgcagactccacagcccgaggagaag
aaggaagaagctgagccctttaattatgaggccgctgactccgtcctacacgcacagcca
gcccagaccgccacacttcacaagaaacggccattcaacccatacaagaaggcgcttgag
gcacccagtggagtgcgcaagcagaagcgtgagacccccggcaagtcattcactttcagg
tga
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