Aspergillus oryzae: AO090010000458
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Entry
AO090010000458 CDS
T01018
Name
(RefSeq) unnamed protein product; DEAH-box RNA helicase
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
aor
Aspergillus oryzae
Pathway
aor03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aor00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
AO090010000458
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aor03041
]
AO090010000458
Enzymes [BR:
aor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
AO090010000458
Spliceosome [BR:
aor03041
]
Complex C
Other components
Step II factors
AO090010000458
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
S1
WHD_HA2
DEAD
AAA_22
AAA_30
T2SSE
AAA_19
GIPC1_GH2
AAA_16
nSTAND3
nSTAND_NTPase5
SRP54
Motif
Other DBs
NCBI-GeneID:
5999578
NCBI-ProteinID:
XP_001827444
UniProt:
Q2TWR2
LinkDB
All DBs
Position
8:<2166972..>2170661
Genome browser
AA seq
1229 aa
AA seq
DB search
MDDLQSLELFSLVSRITSELQNHLGINDKTLAEFVIDQHLKCGSFSKFKETLDEMGAEFP
QSLMESIDRLVLTMHPKYKTKKTDDADKAEGGDDMDVLDALEKKARVFKGLAVPDKAPQW
DEDDYTDRKNSDEGDAKADAMDDTFAMLEGLAGKAREEKGHTTGEDRSSRKRSRSPGYDD
YDRGRRRKDKYRSQSRSHSPRYRKRDDDVDEFGRTRSKYSSRDEHRDGRSERRQRRHDRS
QDDHFRKPPPVELDDAPILYKVYDGRVTGVKDFGAFVNLSGVKGKVDGLVHVSAMQEGAR
VNHPSDLVSRGQPVKVKVISIQGSRIGLSMKEVDQVTGLDLIPQRRLASGANMERLDGTS
ANDRYGNLSSDVPVIEDSNGRPMKNRKRLTSPERWEIRQLIASGVASAADYPDLDEEYHA
TLTGEGTFEEEEDIDIEVRDEEPPFLAGQTKMSLELSPIRVVKAPDGSMNRAAMAGTNLA
KERRDLRQQEAQDKAAEQAAGVDLNAQWQDPMAAPEDRKFAADLRTAQQPKPDDAVPEWK
RVTMGKNQSLGKRTSMSIKQQRESLPVFKFRKQLLDAVRDNQLLIVVGDTGSGKTTQLTQ
YLAEAGYGNNGIIGCTQPRRVAAMSVAKRVAEEVGCKLGAEVGYTIRFEDCTSPETRIKY
MTDGMLQREVLLDPDLKRYSVIMLDEAHERTIATDVLFGLLKKTIKRRPDLRLIVTSATL
DAEKFSEYFNGCPIFSIPGRTFPVEIMYSKEPESDYLDAALITVMQIHLTEPSGDILVFL
TGQEEIDTSCEILYERMKALGSSVPELVILPVYSALPSEMQSRIFEPAPPGGRKVIIATN
IAETSITIDNIYYVIDPGFVKQNAYDPKLGMDSLVVTPISQAQAKQRAGRAGRTGPGKCF
RLYTEAAYQSEMLPTTIPEIQRQNLSHTILMLKAMGINDLLHFDFMDPPPTNTMLTALEE
LYALSALDDEGLLTRLGRKMADFPMEPALAKVLIASVDMGCSEEVLTIVAMLSIQSVFYR
PKEKQQQADQKKAKFHDPQGDHLTLLNVYNGWKNSKFNNAWCFENFIQARQIRRAQDVRQ
QLLGIMDRYHHRIVSCGRNTTKVRQALCTGFFRNAARKDPQEGYKTLVEGTPVYMHPSSA
LFGKPAEHVIYHTLVLTTKEYMHCTTAIEPKWLVEAAPTFFKVAPTDRLSKRKKAERIQP
LHNRFAGEDDWRLSAQRRQGRGGGGGTWG
NT seq
3690 nt
NT seq
+upstream
nt +downstream
nt
atggatgacctccagtctctggagctcttttcgctcgtttcgcgaattacgagcgaactc
cagaaccacttgggtatcaatgacaagacattagcggagttcgtgattgaccagcatctg
aaatgcggttcattttcgaaattcaaggagaccctagacgagatgggcgcggagttccct
cagagtttgatggagagtattgaccgtctggtgctcactatgcacccgaaatataagacg
aagaagacggatgatgccgacaaagcggaagggggtgatgatatggacgtactcgatgca
ctcgaaaagaaggcgcgcgttttcaaaggtctagctgttccggacaaggcaccgcagtgg
gatgaggacgactatacggataggaaaaattcggacgaaggcgatgccaaggccgatgca
atggatgatacatttgcgatgcttgaagggctagcaggaaaggcccgagaagagaagggt
cacacgacaggcgaggaccggagtagcaggaaacggagcagaagccctggttacgatgac
tacgatcgtggacgtcggcgcaaggacaaatatcgttcccaatcgaggtcacatagcccc
cgttatcgtaagagggatgacgacgttgacgaattcggccgtacgcgaagcaagtattcc
agccgggatgaacatcgcgatggtcgcagcgagcggcgccagcggcggcatgaccggagc
caggacgaccattttcggaaaccacccccagttgagctagatgatgccccgatactgtac
aaggtctacgatggacgtgtcactggtgtgaaggacttcggagccttcgtgaatctctca
ggcgtcaaaggcaaagtggatggtctggtacacgtttctgcaatgcaagaaggagcgcga
gtaaatcacccttcggatttggtctccagaggtcagccggtcaaagttaaggtcatcagt
atacaagggtctcgcattggactttcgatgaaggaggtcgaccaagtgactgggcttgat
cttattcctcaacgccgactggcatctggcgccaatatggaacgcctcgacgggacttca
gctaatgaccgatatggaaacttgagctcggacgtgcctgtcatcgaggattctaatgga
aggcctatgaaaaaccgaaagcgtttaacttcaccagagcggtgggaaattagacagctg
atcgcatccggtgttgcgtcagcggctgactaccccgatctcgacgaggaataccatgca
acactgacaggcgagggcacctttgaggaggaagaagatattgatattgaagtccgagat
gaggagccgccctttttggctggtcaaactaagatgtccctggaattatctcctatcaga
gttgtcaaggcgccagatgggtctatgaacagagcagctatggcgggtacgaacttggct
aaagaacgaagagaccttcgtcaacaagaggctcaggataaggctgcggaacaagctgca
ggagttgatcttaatgcacaatggcaagatccaatggccgcgccagaagaccggaaattt
gcggctgatcttcgaacggcccaacaacctaaacccgatgacgctgtgcctgaatggaaa
agagttacaatgggcaagaatcaatctcttggcaagcgaacatcgatgtctattaagcaa
caacgcgaaagtctgccggttttcaagttccggaagcaacttcttgatgctgttcgtgac
aaccagttgttgattgttgttggagatactggttccggaaagaccacacaactgacacag
tacttagctgaggctggttatggaaataatggcattatcggatgtacccaaccaagacgt
gtggccgcaatgtcagtcgcaaaacgtgtagctgaagaagttggctgcaagctcggtgca
gaggttggatacacgattcgttttgaagactgcaccagccctgagacacgaatcaaatac
atgactgacggaatgcttcaaagagaagtccttctagacccagacttgaagaggtactca
gtcatcatgcttgatgaggcccacgagcggacaattgctacagacgtccttttcggattg
ctaaaaaagacaataaagcggagacctgatcttcgacttattgttacttcggctacgtta
gatgcagagaagttctccgagtatttcaacggttgccccattttctcgatccctggacgt
acattcccagtcgagattatgtattcaaaggagcctgagtctgactacctggatgcggct
ttaatcactgtcatgcagattcacttaacggagccttctggtgatattcttgtttttctg
acgggacaagaagaaattgatacctcatgtgagattttgtacgagcgaatgaaagcgttg
ggttcttctgtaccagagcttgttatccttcctgtctactctgctcttcccagtgagatg
cagagtaggatttttgaacctgcaccaccaggaggcaggaaggtaatcattgcaaccaat
attgccgaaacatccattaccatcgacaacatctactatgtcattgatcctggcttcgtg
aagcaaaatgcttacgatccgaaacttggtatggactccttggtggtcactcctatctcg
caagcgcaggccaagcaacgagccggccgtgctggaagaacaggtccaggaaagtgtttt
cgtctgtataccgaagcagcttaccaatcggaaatgttgccaaccacaattcccgagatc
cagcgtcaaaatctgtcacatactattcttatgcttaaagctatgggtatcaatgatctg
ctccactttgacttcatggaccctcctccgacaaacaccatgcttactgcgctggaggaa
ctttatgcattgtctgcactcgatgatgaaggccttctgactcgtttgggtaggaagatg
gcagacttccccatggaaccagcacttgccaaggtcctcattgcgtcagtcgacatggga
tgttccgaggaagtccttaccatcgttgccatgctctctatccaatcggtcttttataga
cctaaagaaaagcagcagcaggcagatcaaaagaaagccaagtttcacgacccacaaggc
gatcacttgaccctactaaatgtgtacaacggctggaagaattcaaagttcaacaatgct
tggtgtttcgagaacttcatacaggcgcgtcagatccgccgtgctcaagacgtgcgccag
cagcttcttggtatcatggaccggtaccatcaccgcatcgtctcatgtggaaggaacaca
actaaagtacgtcaagcactatgcaccgggttcttcagaaatgcagcgcgcaaggacccc
caagaaggatacaaaacacttgttgagggtacacccgtctatatgcaccccagttctgcg
ttgtttggcaagccggctgaacacgtcatttatcacacattggtccttacgacgaaggaa
tacatgcactgcactacagctattgagcctaaatggctggtcgaggcagctccgaccttc
ttcaaggtcgctcccactgaccgcctgtcgaagcgtaagaaggctgagcgtatccaaccc
ttgcacaatcgctttgcgggtgaggatgattggcgtctatccgcacagaggcgtcaaggt
agaggaggtggtggaggaacttggggttaa
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