Aspergillus oryzae: AO090011000924
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Entry
AO090011000924 CDS
T01018
Name
(RefSeq) unnamed protein product; mRNA splicing factor ATP-dependent RNA helicase
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
aor
Aspergillus oryzae
Pathway
aor03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aor00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
AO090011000924
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aor03041
]
AO090011000924
Enzymes [BR:
aor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
AO090011000924
Spliceosome [BR:
aor03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
AO090011000924
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
WHD_HA2
Helicase_C
HA2_C
DEAD
AAA_22
AAA_19
nSTAND3
PWI
SRP54
Cas3-like_C_2
AAA_30
nSTAND_NTPase5
TsaE
AAA_23
Motif
Other DBs
NCBI-GeneID:
5998587
NCBI-ProteinID:
XP_001826484
UniProt:
Q2TZB4
LinkDB
All DBs
Position
7:complement(<2415274..>2418633)
Genome browser
AA seq
1119 aa
AA seq
DB search
MDNRTFVSDSLLRLTNASDPTVVDFVLATASSAKSADSLQEKLVPFLDGSTEDINAFCWE
LYKRVGAGAKSGPSTGAQQERSDTASKKKYRLIQMEDDNPDSASSLGPTNIETERERRKR
KVKDRNRTKEEPEGHNRWEKEENRKRARSLEESRDRHRSKKLRRRDKGDFDDRWGDEEIP
DDEVYEEDEQIDNFEESPSKRTRLEDGSASPRSTDSADLDPDTKKEIERRRDIEERDEFA
KRLAKKDDSKNKKIVEDRTRNSEVARRRALADDASARAAAMPELRMRSRQEYLKKRETER
LALLRRQVAEEAAELRDNPNLTRREKEEFARNREVLRIAEERLRIDDYRDGYMMPDDYIT
EKGKIDRRKKEDALYKRYVDRDEYGQERFITEHEEWEMEQTAKAKAQINRAEFVDEGDYE
YVFDDSQKINFVMDAKMEGTRKAMSQEQRIFQEKLDAAEKKAASIEDTRKSLPIYQFREE
IIQAVHDHQVLIIVGETGSGKTTQIPQYLHEAGFTKNGMKVGCTQPRRVAAMSVASRVAE
EMGVKLGNEVGYAIRFEDNTSDKTVLKYMTDGMLLRELLTEPDLGQYSALMIDEAHERTV
PTDIACGLLKDIAKARPDLKLLISSATMDAQKFQQYFDDAPIFNIPGRRYPVDIHYTSQP
EANYLAAAITTVFQIHVTQGPGDILVFLTGQEEIEAAEQSLQETARKLGSKIPEMIICPI
YANLPSELQTKIFEPTPPKARKVVLATNIAETSLTIDGIVYVIDPGFVKENVFNPRTGME
SLVVTPCSRASANQRAGRAGRVGPGKCFRLYTKWAYYNELEESTTPEIQRTNLSSVILML
KSLGIDQLLDFDFMDPPPAETIIRALEQLYALGALNDRGELTKVGRQMAEFPTDPMLAKA
ILAADKYGCVEEVLSIVSMLGEASALFFRPKDKKIHADSARNRFTIKDGGDHLTLLNIWN
QWVDSDFSYVWAKENFLQQRSLTRARDVRDQLAKLCDRVEVTVSTCGSNNLQPIQKAITA
GFFPNAARLQRGGDSYRTVKNGQTVYLHPSSTLFEVNPRWVIYFELVLTSKEYMRSNMPL
QAEWLMDVAPHYYKKKDLETLGIERKMKGQGAAGEKSRD
NT seq
3360 nt
NT seq
+upstream
nt +downstream
nt
atggacaatcgaacattcgtgtcggattctctcctccgccttaccaatgcctctgatccc
accgtcgtcgactttgtgctcgccactgccagctcagccaagtcagcggattcattacaa
gagaagctcgttcctttcttggatggaagcacagaagatattaatgcgttctgttgggaa
ctgtataaacgggtgggtgcaggcgcaaagagcgggcccagcaccggtgctcagcaagag
cgcagtgataccgcctcgaaaaagaagtaccgattaattcaaatggaagatgacaatcca
gactctgcaagctctttggggcccacgaacatcgaaacagaaagggagaggcggaagcgc
aaagtcaaggatcgcaaccgaaccaaggaggaacctgaggggcacaatcgctgggaaaag
gaagaaaacaggaagcgcgcgcggagcctggaagagagccgggatcgccaccggtctaag
aagctgcgacgacgggataaaggggacttcgatgatcgctggggtgacgaagagattccg
gatgatgaggtatatgaagaagatgagcaaatcgataattttgaagagtcgccgtcgaag
cggactaggctggaggatggatctgcgtcaccccggtcgactgactctgcggacctggac
ccagatacgaagaaggaaatcgagcgacgacgggacatagaagaacgagacgagttcgcg
aagcggttggccaagaaggatgacagcaagaataagaagatcgtcgaggaccggactaga
aatagtgaggtcgcacgaagacgagctttggcagacgatgcttccgctagagctgccgct
atgccagaactgagaatgcgttctcggcaagaatatctcaagaagcgagagacagaacga
ctagcccttctgcgccgacaggttgcagaggaagcggcagagctgcgtgataaccccaat
ttgacacggagagagaaagaggagtttgctagaaatcgtgaagtacttcggattgctgag
gagcggctacggatcgatgattaccgcgatgggtacatgatgccagatgactatatcacg
gagaaggggaaaattgatcgaaggaagaaagaagatgctctttacaaacgctatgtggat
cgcgacgaatatggacaagagcggtttattactgagcatgaggagtgggagatggagcaa
actgccaaggccaaggcgcaaatcaacagggcagagttcgtggatgaaggtgactacgag
tatgtttttgacgactcgcaaaagatcaacttcgtcatggatgccaagatggaagggact
cggaaggctatgtcccaggagcaacgtattttccaagaaaagctagacgctgctgagaag
aaggcggcatcgatagaggatacgcggaaaagtctgcctatctatcaattccgggaggag
atcattcaagcagtccatgatcaccaagttttaatcattgtcggcgaaacaggttctggt
aaaacgacccagatcccgcagtaccttcatgaagccggtttcacaaaaaacggaatgaaa
gtcggttgtacgcaacctcgacgagtcgcagccatgagcgttgcatctcgagtagccgaa
gaaatgggagtgaagctgggtaatgaggtcggttacgccattcgtttcgaagacaacaca
agcgacaaaacagtgctcaagtatatgacggatggtatgctgttacgtgaactgctaaca
gagccagacttgggccagtactcagcgttgatgatcgacgaggcacacgaaagaactgtg
cctacggacattgcctgtggcctgctaaaggatattgctaaggcacggccagatctgaaa
ctgctgatttcctctgcaacaatggatgcacagaagttccagcaatactttgatgatgca
cctatctttaatatcccggggcgacgttaccctgtggatatccactatacatcacagcca
gaggcgaactacctggccgcagcaatcacaaccgttttccagatccatgtcacgcaaggt
cctggagatattcttgtgttcttaactggccaggaggagatcgaggcggccgaacagagc
ctgcaggagactgcgcggaaactggggagcaagataccagaaatgataatatgccctatc
tatgccaatctaccatcagagctacagactaaaatctttgagccgacgccaccgaaggca
cggaaagtcgtacttgctacgaacattgccgagactagtttgaccattgacggtattgtc
tatgtgatcgatccaggttttgttaaggaaaatgtcttcaatccccgaactggaatggaa
agtttggtagtgacgccgtgctcgcgggcgtcagccaaccagagagccggtcgagccggc
cgagttggtccagggaaatgtttccgtctctacacgaaatgggcttactataatgaattg
gaggagagcacgacgcccgaaattcagcgtacaaatctcagtagcgtcatcctgatgctc
aagtccctagggattgatcagttacttgacttcgactttatggaccccccaccggccgag
actattattagagcattggagcagctttatgctttaggtgcactgaatgataggggcgaa
ctaactaaggttggaaggcaaatggcggagtttccgacagaccccatgctggccaaagcg
atcttggcggcggacaaatatggctgtgtggaggaggtgctttctattgtgtcaatgcta
ggggaggccagcgctttattcttccggcccaaggacaagaagatacatgcggatagtgca
cgcaatcggttcacgatcaaggatggcggggatcatttgactttgctcaacatttggaac
cagtgggtggattctgactttagctatgtgtgggcgaaggaaaactttctgcagcagcgc
agcttgactcgggcacgcgatgtacgcgatcaattggcgaaattgtgtgatcgagtcgag
gtcactgtcagtacatgtgggtcgaacaacctgcaaccgattcagaaagccatcacggct
gggttcttcccgaacgcagcgcgcctgcaacgtggtggtgatagttaccggacggtgaag
aatgggcaaacagtatacttgcacccgtcaagtacgctgttcgaagtcaatccccggtgg
gtaatctatttcgaactcgtgcttactagcaaagaatacatgcggagcaatatgccactt
caggccgagtggttaatggacgtcgcgccgcactactataagaagaaagacttggagaca
ttgggcatcgaacggaaaatgaaaggacagggagcggcaggcgaaaagagtcgagactga
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