Aspergillus oryzae: AO090012000584
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Entry
AO090012000584 CDS
T01018
Name
(RefSeq) unnamed protein product; RNA helicase nonsense mRNA reducing factor (pNORF1)
KO
K14326
regulator of nonsense transcripts 1 [EC:
5.6.2.5
5.6.2.3
]
Organism
aor
Aspergillus oryzae
Pathway
aor03013
Nucleocytoplasmic transport
aor03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aor00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
AO090012000584
03015 mRNA surveillance pathway
AO090012000584
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aor03019
]
AO090012000584
Enzymes [BR:
aor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
AO090012000584
5.6.2.5 RNA 5'-3' helicase
AO090012000584
Messenger RNA biogenesis [BR:
aor03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
AO090012000584
mRNA cycle factors
Common to processing body (P body) and stress granule
AO090012000584
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF1_Zn_bind
AAA_12
AAA_11
UPF1_1B_dom
AAA_30
AAA_19
ResIII
DEAD
UvrD-helicase
NPHP3_N
Helicase_RecD
PIF1
SLFN-g3_helicase
nSTAND3
AAA_22
AAA_16
ATPase
AAA_10
Ribosomal_S27e
Motif
Other DBs
NCBI-GeneID:
5988051
NCBI-ProteinID:
XP_001727577
UniProt:
Q2UCH7
LinkDB
All DBs
Position
4:1482546..1485827
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AA seq
1072 aa
AA seq
DB search
MAALGDDSRELDDITGGLRPRRHDDDDDGSDNGDDDLESTTSAPAAENAENQRHTEEEKE
LPPHACAYCGIHNPSSVVKCLSCSKWFCSARGNTSSSHIVNHLVRARHKEVQLHPASSLG
DTILECYNCGTKNVFLLGFIPAKSDTVVVLLCRQPCAAMPSSKDMNWDTSRWQPLIEDRS
FLPWLVAAPSDQEQLRARHLSPQLIAKLEEMWKENSQATFSDLEKATAVDDEPAPVLLRY
DDAFQYQNIFGPLVKIEADYDRKLKESQSQDGLIVRWDLGLNNKHLASFILPKLELGDVK
LAVGDEMRLKYTGELRPKWEGVGYVIKIPNNQSDEVTIELRAKGDHKSVPTECTHNFTAD
YVWKSTSFDRMQLAMKTFAVDEMSVSGYIFHRLLGHEVAAAPMKTQMPKKFSVPGLPELN
GSQINAVKSVLQRPLSLIQGPPGTGKTVTSATIIYHLAKLNGGQVLVCAPSNVAVDQLCE
RIHRTGLKTVRVTAKSREDVESPVGFLSLHEQVRLNDSNIELLKLNQLKAELGELSSQDE
KRLKQLTRSAEREILNNADVICCTCVGAGDPRLAKLKFRTVLIDESTQSAEPECMIPLVL
GCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVILGCSPIRLNVQYRMHPCLSEFP
SNMFYEGSLQNGISSIERLRRDVDFPWPISDNPMMFWSNLGNEEISASGTSYLNRTEATN
VEKIVTRFFKAGVQPGDIGIITPYEGQRSYIVSSMQATGTFKKEHYKEIEVASVDAFQGR
EKDFIILSCVRSNDHQGIGFLSDPRRLNVALTRAKYGLAILGNPKVLSKHPLWNCLLQHF
KERHCLVEGPLSNLQESLIQFSRPKQAYRGPQRFQMAYNHASSVTSGMMNGKNGHRNDFH
DTGSVVGYIPDDVSSVHSSALGGVGIPSGYPPMFQNFADSWPALPGNRRANGNRGKGAPS
IAGESIAATESDVTASIIDGKSVDQGGVSLAGLSIHDMSKQPSLSQSDRLKRYVESGGRE
PYKPGVADNNSIFGGSSASIRVTRGVPGHIIDDDDTRSVSTAFASQVGGNYD
NT seq
3219 nt
NT seq
+upstream
nt +downstream
nt
atggcggctctaggcgatgattcaagggaattggatgacataactggtggtctccgcccg
cggaggcatgacgatgatgatgacggctcggataatggggatgacgacctagaaagtaca
actagtgctccggctgctgagaatgcagaaaatcaaagacacacggaggaggaaaaggag
cttccgccacatgcatgcgcatattgcggcattcataatccgagcagtgttgtgaaatgt
ctctcatgcagcaaatggttttgcagtgctcgtggaaatacgtcgtcctctcacattgtc
aaccacctcgttcgagcacgacacaaggaagtgcaattacaccctgcctcgtctctcgga
gatacaattctggagtgctataattgcggaactaagaatgtctttcttcttgggttcatt
ccagcgaagtccgatacggtcgtcgtattactatgccgccaaccttgtgccgccatgcca
tcgtccaaggacatgaactgggatacttcccgctggcagccactcatagaagatcgttca
tttctgccatggctagtagctgcgccgtctgaccaagagcaactgcgagctcgccacctc
agccctcagcttattgcgaaattggaggaaatgtggaaagaaaactcccaagccacgttt
tcagatctcgagaaggccaccgctgtagatgacgaacctgctcccgttcttttacgttat
gatgatgctttccagtatcaaaacatctttggaccactcgtcaagattgaagcggattac
gatcgaaaattgaaggagtcgcagtcgcaggatgggttgattgtgcgttgggaccttggt
cttaacaacaaacatctggctagcttcattctcccaaagcttgagcttggagacgtcaaa
ttggctgtgggagacgaaatgcgactgaaatacactggtgaactgcggcccaagtgggaa
ggggttggatacgtcatcaagatcccgaacaaccagtctgacgaggttactattgagttg
cgagcaaagggagatcataagtcggtgcctacagaatgtacacacaatttcactgccgac
tatgtatggaagtccacctcctttgatcgtatgcaactcgccatgaagacattcgcagtt
gatgagatgagcgtttccggctacattttccatcggcttctgggtcacgaggtcgccgct
gcaccaatgaagacacaaatgcctaagaagttcagtgtccctggacttccagaactaaat
ggtagccagattaatgcagtcaagagtgtgctacagaggcctctgagtctcattcaggga
cctcccggaaccggaaagactgtcacctccgctaccatcatttatcatcttgccaaactt
aatggaggtcaggtcctagtctgcgctccttccaacgtcgctgttgatcaactctgcgag
cgtatccacagaacaggtttgaagacagtgcgtgtaaccgccaaatctcgcgaagatgtg
gaatctcccgttggcttcttgtccctgcatgagcaagttcgcctgaatgacagcaatatt
gaactcctgaagcttaaccagcttaaggcggaactcggggagttgtcaagtcaagacgaa
aagcgactgaaacagctcacgcgttcagcggagcgcgagattctgaacaacgctgacgtt
atctgctgcacttgcgtcggtgccggtgaccctcgtctcgcgaaactcaagttccgcact
gtattaattgacgaatctactcaatcagccgaaccggagtgtatgattccgttggttcta
ggatgcaagcaggttgttctcgttggtgatcatcagcaacttggacccgtcattatgaac
aagaaagcagccaaagcaggcctcaatcagtcgctttttgagcgacttgttatattgggt
tgctctcctatccgcttgaacgtgcagtatcgtatgcatccctgtctttcagaattccca
tcgaacatgttctacgagggctctctgcagaacggtatctcttctattgagcgtcttcgt
cgtgatgttgacttcccctggcccatcagcgataatcctatgatgttctggtcgaacctt
ggcaatgaggagatctccgcctctggaacttcttatctcaatcgtaccgaagccacaaat
gtggagaaaattgtgacccgtttcttcaaggctggtgtacagcctggagacattggtatc
attaccccttatgaaggccagcgtagctacattgttagctccatgcaggcaaccggtacc
tttaagaaggagcactacaaggaaatcgaagttgcctccgttgatgctttccagggacga
gagaaggacttcatcatcctctcttgtgtgcgttccaacgaccaccaaggcatcggtttc
ttgagcgatccgcgtcgtctcaatgttgcgcttacacgagcaaagtatggtctagcgatc
cttggtaatccgaaggtgctatctaagcatcccttgtggaactgcctgttgcagcacttc
aaagaacggcattgtctggtcgaggggcctctgtctaatcttcaggaatccctgatccag
tttagccggcctaaacaggcatatagagggccccagcgattccagatggcgtataaccac
gcctctagtgtgaccagtggaatgatgaatggaaaaaatgggcaccgcaacgacttccac
gacaccggatccgtggtaggctatattcctgatgatgtctcctctgtccattcttctgct
cttggcggtgtcggtattccttcaggatatcctcctatgttccagaacttcgcagactct
tggcctgccctcccaggaaaccgtcgggccaatggtaacagaggaaagggggcgcctagc
attgctggcgaatccattgcagcgacagaatctgacgttactgcaagcatcattgatggc
aagagtgttgatcagggcggcgtgagtctcgctggacttagtatccacgatatgagcaaa
cagcccagtctcagtcagtccgaccggctgaaacgctatgtcgaatccggtggtcgcgag
ccttacaagcctggtgttgctgataataacagcatctttggtggaagctctgccagcatt
cgtgtgactcgtggtgtaccaggccacatcattgatgacgacgacacacgcagcgtttct
actgcgtttgcgagccaggtagggggaaactacgattga
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