Aspergillus oryzae: AO090020000058
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Entry
AO090020000058 CDS
T01018
Name
(RefSeq) unnamed protein product; transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
aor
Aspergillus oryzae
Brite
KEGG Orthology (KO) [BR:
aor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aor03021
]
AO090020000058
03036 Chromosome and associated proteins [BR:
aor03036
]
AO090020000058
Transcription machinery [BR:
aor03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
AO090020000058
Chromosome and associated proteins [BR:
aor03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
AO090020000058
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
HTH_44
Spt6_S1
HHH_7
YqgF
SPT6_acidic
Tex_central_region
HHH_9
HHH_3
SH2
ARM_ECM29_C
S1
B12-binding
Motif
Other DBs
NCBI-GeneID:
5996523
NCBI-ProteinID:
XP_001824437
UniProt:
Q2U561
LinkDB
All DBs
Position
6:1660898..1665438
Genome browser
AA seq
1422 aa
AA seq
DB search
MSARDLVEGEAMLDDEENEEELADDYDGEGEAHQGAGTANPYDSSEEDDDDDDDEEAARA
VREGFIVDEDEELEDRAERRREKRKRRREEREREDEHLDEEDLELIGELNPSLQAPVAAE
SKFKRLKRGHKDRDLRQPSQGIDDIFNSDEEEEAAGDYGRHGHRRHMHDEMDDFIEEDVF
SDEELQREREDLEIARPAKKGMTGLGATDAAGLDENALEDMRAAFGDGNEYLFALEMEDQ
EEEQEEDEEKHLDLKDVFEPSQLAEKMLTEEDNQIRLLDEPERHQIARKPYRNVVLTEEQ
FREEAAWISNLMLLKKRIEPELREPFQRSVAKVLEFLVTDDWEVPFIFQHRKDYMIHAVK
APVEGAGEDGDASQYTVRAEKLLNMTDLWDIFDHDLKFKALVEKRNTIQKTYDNLQSLFN
VSDSVVEEMLPAAVTMEELQDVQDYIHFQYASQLRDMTLMNSDVNGETHRRKASSKTFFE
RVRNGKAYGLVRAFGITADAFAQNALKEGRRQYTEDPAERPEEMADGFVDNDFSNASHVI
KAAKSLFAEEIVMSPKMRKVIRQAYYMNGAVDCFRTEKGLRRIDEQHPYYEFKYLRNQQL
SDIARRPELYLRMLKAEEEGLVEVKVRFENFDQFRQRLYPDIESDNYSEIADGWNRSRRD
VLDMALGKLERLINRSVKENIRQECENHVAKECRETFSQRLDQAPYKPKGMVLGTVPRVL
ALSTGSGVVGREPIHWAYIEEDGRVLENGKFVDLSIGDRDRNIPDGKDVEAFVELVDRRR
PDVIGVSGMSPETRRLYKLLAEVVDKKDLRGAPYTDDHDEEISDRLEVIIVNDEVARLYQ
HSERAKKDHPSFAPLTHYCVALAKYLQSPLKEYASLGRDIVSIQFKPGQQLVTQELLLKQ
LETALVDMVNLVGVDINEAVTDSSTANLLPYVCGLGPRKAAHLLKIVNMNGGVVNNRVEL
LGVNAQYPAMGVKVWNNCASFLYIDFENVDPDADPLDNTRVHPEDYDIARKMAADALELD
EEDIKAETDENGTGAIVRKLFREEAQDRVNDLILEEYAEQLEKNLNQRKRATLETIRAEL
QQPYEELRKQYVFLSTDDIFTMLTGETSDTLAEGMVVPISIKRVSDDHIDGKLDCGIDAL
VPESELTDRYDIPVRALYSPHQTVSAKILFLNRKNFTCNVSLREEQVSRPVSNTQDRLRG
EWDERQEQQDRESLQEKTQSGGRTMRVIKHPLFRPFNSTQAEEFLGSQSRGDVVIRPSSK
GHDHLAVTWKVADGIFQHIDVLELDKENEFSVGRTLKVGGRYTYSDLDDLIFNHVKAMAK
KVDEMMLHEKYQDGTKDATYSWLETYTKANPKRSAYAFCIDPKHAGYFFLCFKAGENARL
HSWPVKVIPQGYELQRNPYPDMRALCNGFKLLFTNMQAGKRR
NT seq
4269 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcccgcgatcttgtcgagggagaggccatgctggatgatgaggagaatgaagag
gagttggctgatgactatgacggcgaaggcgaagctcatcagggtgctggcactgcgaat
ccctacgactcaagtgaagaggacgatgatgatgatgacgatgaggaggccgcccgtgca
gtccgggaaggttttattgtcgatgaagatgaagaactggaagaccgcgcggagcgccgg
cgggagaagagaaagcgacgtagggaagaacgcgagcgcgaagatgagcacctagatgag
gaagacttggaactcatcggagaactcaatccgtcacttcaagccccggttgctgcagag
tctaaattcaagcgcttgaaacgaggacacaaagatcgtgatcttcgacagccctctcaa
ggtatcgacgacattttcaactccgacgaagaagaggaagctgcaggcgactatggaagg
catgggcataggaggcatatgcatgatgagatggacgacttcatcgaggaggacgttttc
tcggatgaggagctacagagggaacgagaggacctagagattgcgcgtcccgcaaagaag
ggcatgaccggcttaggagctactgatgctgctggactagatgaaaacgccttagaggat
atgcgcgcggcttttggagacggcaatgaatacttgtttgctctggagatggaggatcaa
gaggaagagcaggaggaagatgaagagaaacacttggatctcaaggatgtctttgagcca
tctcagttggcggagaagatgttaacggaagaggataatcagatccgtctgttggatgaa
ccggaaagacatcagattgcccggaagccgtatcgcaacgttgtcctcaccgaagagcaa
ttccgagaagaagccgcctggatctctaacctcatgctcctcaaaaagcgcattgaaccc
gagctgcgcgaacctttccaacgatctgtggccaaggtgcttgagttcttagtgacggat
gattgggaagtcccgttcatcttccagcatcggaaggactacatgattcatgctgtcaaa
gctcctgtcgagggtgccggagaagatggtgacgcgtctcaatacacggtacgagcggag
aagctcttaaacatgacggacctctgggacatattcgaccatgatctcaagtttaaggct
ctggtagagaaacgaaatacgattcagaaaacctatgataatttgcagagtctattcaac
gtgagtgactctgttgtggaggagatgctcccagcagctgtcacgatggaggagcttcaa
gatgtgcaggattacattcacttccaatatgcgtctcagctgcgggacatgactcttatg
aacagcgatgtgaacggagaaacacaccggcggaaggcgtcaagcaaaacctttttcgag
cgtgtccgaaatggtaaggcatacggcttggtgcgtgcatttggcattacagcagatgct
tttgcgcaaaatgctttgaaggaaggtcgtcgtcagtatacggaagacccagcagagagg
ccggaggagatggccgacgggtttgtggataatgatttctccaatgcatcgcatgttatt
aaagctgccaagagcttgttcgccgaggaaatcgtgatgagccctaaaatgcgaaaggtc
attcgccaggcgtactacatgaatggcgctgtcgactgcttccgaacggagaagggcctc
cgtaggatcgacgagcagcacccctactatgagttcaaataccttcgaaaccagcagctc
agtgacattgcccgccgaccggagctttatcttcgcatgcttaaggccgaagaggagggt
ttggtggaagtcaaggtccgcttcgagaactttgaccagttccgccaacgtctttatccc
gacattgaatccgataactatagcgaaatagcggacggctggaaccgtagtcgtcgggac
gtcttggacatggctcttggtaagttagagcgactgattaaccgcagcgtgaaggagaac
atccgccaggaatgtgagaaccatgtggcaaaggaatgtcgagaaactttctctcagcga
ttggatcaagccccctataagcctaagggaatggtgctgggaactgttccccgcgttttg
gctttgtccactgggagtggggttgtgggacgggaacctatacattgggcctacattgaa
gaggacggccgtgtgttagaaaatggaaagtttgtggacttgtcaatcggagatcgtgat
cgtaacatcccagatggcaaggatgttgaggccttcgtggagcttgtggatcgccgccga
ccggatgtcattggcgtcagcggcatgtcccccgagactcgtcgtttatacaaactcctg
gctgaggttgtcgacaaaaaggatctgcgcggcgctccgtacaccgatgaccatgacgaa
gagatcagtgatcgcttggaagtgatcattgtgaacgacgaggtggcgcgtctctatcag
cacagcgaacgggcaaagaaagaccaccccagctttgcccctttgacacattactgcgtt
gctctagctaagtacctgcagagtcccttgaaggagtatgcttcgttaggccgggacatt
gtctctattcagttcaagccgggtcagcagctggttacccaagagctacttctaaaacaa
ctagaaacggcattggtggatatggttaaccttgttggtgtggatattaatgaagcggtt
acggattcctcgacggccaaccttcttccttacgtttgtggtcttggtcctcgtaaggca
gctcatctactcaagatcgtcaacatgaacggtggcgtggtgaacaaccgtgtagagctt
ctgggtgtgaatgcgcagtatccagcaatgggcgtcaaggtctggaacaactgtgccagc
ttcctgtacatcgatttcgagaacgtcgatccggatgcggatccattggacaacacacga
gtacaccccgaggactacgatattgctcggaagatggccgccgatgccttggagctagac
gaggaagatatcaaagcggaaacggatgagaacggcacaggcgctatcgtgcgtaaactg
ttccgtgaagaagcacaggaccgagtcaatgatctgattctggaggagtatgcggaacag
ctggaaaagaatctgaatcagcgaaaacgcgccacactcgaaaccattcgggcagaactg
caacagccgtatgaggaactgcggaagcaatatgtcttcctcagtacggacgacatcttt
accatgctcacgggtgagacatcggacactttggccgaaggcatggtggtgccaatctcc
attaagcgggtctctgacgaccacattgacggcaaattggattgtggtatcgacgccctc
gttcctgagtcagagcttaccgaccgatatgatatacccgtgcgggcactatactcaccg
catcagaccgtgtcggccaagatactgttcttgaatcgtaaaaacttcacatgcaacgtc
tctttgcgggaggagcaagtcagtcgcccagtgtccaacacgcaagatcgcttgcgcgga
gaatgggatgagcggcaagagcagcaggatcgcgagtctctgcaggagaaaactcaaagt
gggggacgaacgatgcgagtcatcaagcacccattgtttaggccattcaattcgacccag
gcggaggagtttctgggctcgcaaagtcggggtgatgtggttattcggccgtcgtccaag
ggccatgaccatctggctgtgacgtggaaggtggccgatggtatcttccagcatatcgat
gtactggagttggacaaagaaaacgagttctccgttggacggactttgaaggttgggggt
cgttatacctacagtgacttagatgatttgatcttcaaccatgtcaaagcaatggctaag
aaggtggatgaaatgatgctacatgaaaagtaccaggacggcaccaaggatgctacttat
tcttggttggagacttatacgaaagctaatcccaaacgatccgcctatgctttttgtatt
gatcccaaacatgccggatactttttcctttgttttaaggctggtgaaaatgcgcgactg
catagttggccggtgaaggtgattcctcaaggctacgagctccaacgcaatccatatcct
gacatgcgggcgttatgcaatggatttaagttattatttaccaacatgcaagcaggcaaa
cggaggtga
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integrated database retrieval system
