Aspergillus oryzae: AO090102000353
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Entry
AO090102000353 CDS
T01018
Name
(RefSeq) unnamed protein product; predicted ATP-dependent RNA helicase FAL1, involved in rRNA maturation, DEAD-box superfamily
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
aor
Aspergillus oryzae
Pathway
aor03013
Nucleocytoplasmic transport
aor03015
mRNA surveillance pathway
aor03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aor00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
AO090102000353
09122 Translation
03013 Nucleocytoplasmic transport
AO090102000353
03015 mRNA surveillance pathway
AO090102000353
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aor03019
]
AO090102000353
03041 Spliceosome [BR:
aor03041
]
AO090102000353
03009 Ribosome biogenesis [BR:
aor03009
]
AO090102000353
03012 Translation factors [BR:
aor03012
]
AO090102000353
Enzymes [BR:
aor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AO090102000353
Messenger RNA biogenesis [BR:
aor03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
AO090102000353
mRNA cycle factors
Stress granule specific factors
AO090102000353
Spliceosome [BR:
aor03041
]
Complex C
Other components
EJC/TREX
AO090102000353
Ribosome biogenesis [BR:
aor03009
]
Eukaryotic type
90S particles
Helicases
AO090102000353
Translation factors [BR:
aor03012
]
Eukaryotic type
Initiation factors
eIF-4
AO090102000353
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Cas3-like_C_2
AAA_30
AAA_22
TniB
Flavi_DEAD
COG4_N
UvrD-helicase
Motif
Other DBs
NCBI-GeneID:
5994592
NCBI-ProteinID:
XP_001822547
LinkDB
All DBs
Position
4:3565335..3566591
Genome browser
AA seq
398 aa
AA seq
DB search
MYTDKGANSDRMEFNTSKEVTVAPTFEDMHLKESLLRGIYAYGYESPSAVQSRAIVQICK
GRDTIAQAQSGTGKTATFSISILQVIDTVVRESQALVLSPTRELATQIQSVIMALGDYMN
VQCHACIGGTNIGEDIRKLDYGQHVVSGTPGRVADMIRRRHLRTRHIKMLVLDEADELLN
RGFREQIYDVYRYLPPATQVVVVSATLPYDVLDMTTKFMTDPVRVLVKRDELTLEGIKQY
FIAVEKEEWKFDTLCDLYDTLTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGEMPQK
ERDSIMQDFRQGNSRVLISTDVWARGIDVQQVSLVINYDLPTNRENYIHRIGRSGRFGRK
GVAINFVTSDDVRILRDIELYYSTQIDEMPMNVADLLS
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgtatactgacaaaggcgcaaactcagaccgcatggagttcaacacctccaaggaggtc
acggttgctcctaccttcgaggacatgcacttgaaggagagcctcctgcgcggtatctac
gcttacggctacgagtctccatcggcagtgcaatcgcgagccatcgtgcagatctgcaaa
ggccgcgacacgattgcccaggcgcagtccggtacaggtaaaacggctaccttctcgatc
agtatcctgcaggtcatcgacaccgttgtgcgcgagagtcaagcgctcgtgctatccccg
actcgcgaacttgccacgcagatccagtccgtcatcatggcgctcggcgactacatgaac
gtgcaatgccacgcctgcatcggaggcacgaatatcggcgaggacatccggaagctggac
tacggacagcacgtcgtttccggtacgcctggtcgtgtcgcggatatgatccgtcggcgc
cacctgcgcacccgccacatcaagatgctggtgctggatgaagccgacgagctgctcaac
cgcggtttccgtgaacagatctacgacgtctaccgctacctgcccccggccacgcaggtg
gtggtcgtctccgcgaccctcccctacgacgtcctggacatgacgacgaagttcatgacc
gaccccgtgcgtgtgctggtcaagcgtgacgagttgaccctggaaggcattaagcagtac
ttcatcgcggtggagaaggaagaatggaaattcgacaccttgtgtgatctctacgataca
ctcaccatcacccaggccgtgatcttctgcaacacgcgccgcaaggtcgactggctgacg
gacaagatgcgcgaggccaacttcaccgtgtccagcatgcacggcgagatgccccagaag
gaacgtgacagtatcatgcaggacttccgccagggtaactcgcgagtgcttatctcgacc
gacgtctgggcccgtggtatcgacgtccaacaggtctccctggtcatcaactatgatctc
cccaccaaccgtgaaaactacatccaccgtatcggtcgtagcggtcgtttcggaaggaag
ggtgtcgccatcaacttcgttaccagcgatgacgtgcggatcctccgtgatatcgaattg
tactactccacacagatcgatgagatgcctatgaacgtcgccgatctcctctcataa
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