Aspergillus oryzae: AO090102000516
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Entry
AO090102000516 CDS
T01018
Name
(RefSeq) unnamed protein product; nucleosome remodeling factor, subunit CAF1/NURF55/MSI1
KO
K10752
histone-binding protein RBBP4
Organism
aor
Aspergillus oryzae
Pathway
aor03082
ATP-dependent chromatin remodeling
aor03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
aor00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
AO090102000516
03083 Polycomb repressive complex
AO090102000516
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aor03036
]
AO090102000516
Chromosome and associated proteins [BR:
aor03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
AO090102000516
Histone modification proteins
HAT complexes
HATB complex
AO090102000516
HDAC complexes
Sin3A-HDAC complex
AO090102000516
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
AO090102000516
PRC2.2
AO090102000516
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
AO090102000516
Heterochromatin formation proteins
Other heterochromatin formation proteins
AO090102000516
Chromatin remodeling factors
NuRD complex
AO090102000516
NuRF complex
AO090102000516
NuRF complex (fruit fly)
AO090102000516
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
CAF1C_H4-bd
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
WDR55
Beta-prop_TEP1_C
NBCH_WD40
Beta-prop_WDR75_1st
WD_LRWD1
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
EIF3I
WD40_RFWD3
ANAPC4_WD40
Beta-prop_SPT8
Beta-prop_WDR19_1st
Beta-prop_DCAF12
Beta-prop_IFT140_1st
Beta-prop_SCAP
Beta-prop_IFT122_1st
MIOS_WD40
Beta-prop_DCAF4
TAF1C_beta-prop
Beta-prop_LRRK2
SLT_3
Motif
Other DBs
NCBI-GeneID:
5994722
NCBI-ProteinID:
XP_001822677
UniProt:
Q2UA71
LinkDB
All DBs
Position
4:complement(3120659..3122256)
Genome browser
AA seq
436 aa
AA seq
DB search
MEPYDDGFIEEQEEQEEERTEEKVINEEYKTWKKNAPFLYDMILSTALEWPTLTTQWLPD
KQEVPDKPYSTHRLLLGTHTSSDAQNYLQIAHVQLPNPSAPNPDDYDEERGEIGGYGGSS
KKAPMEIKFNIVQKIDHKGEVNKARYQPQNPNVIATMCTDGRVMIWDRSKHPSLPTGTVN
PQMELLGHTKEGFGLSWSPHTAGHLVTGSEDKTVRLWDLTTYTKGNKALKPSRTYTHHSS
IVNDVQYHPLHSSLIGTVSDDITLQILDIREAETTRAAASAEGQHRDAINAIAFNPAAET
VLATGSADKSIGLWDLRNLKTKLHTLECHTDSVTSLSWHPFEESVLASASYDRKIMFWDL
SRSGEEQTPDDAQDGPPELLFMHGGHTNRISDFSWNLNDPWVLCSAAEDNLLQVWKVADA
IVGKDLEDVPTEELEA
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atggagccctacgacgacggatttattgaggagcaggaagagcaggaagaagagcgtact
gaggagaaagtcattaatgaagaatacaaaacctggaagaagaatgcgcctttcttatac
gacatgattcttagtacggcattagaatggcctactcttacaacacaatggctacctgac
aagcaagaggtccctgacaagccgtattcaactcatcgactgctgcttggtacacacacc
tcaagtgatgcgcaaaactatctacagattgctcatgtgcaacttcccaacccttcggct
cctaatccggacgactacgatgaggagcgtggggaaattggtggctatggcggtagctcc
aaaaaggccccgatggaaatcaagttcaacattgtccagaagattgatcataaaggcgaa
gtaaacaaggcgcggtatcaacctcaaaaccccaatgtgattgccaccatgtgtacagat
ggaagggtgatgatttgggatcgctcgaaacaccccagtctacctacgggcacagtgaac
cctcaaatggagcttctaggtcacacgaaggaaggatttggtcttagttggagcccgcac
accgcaggccacctcgtcactggtagtgaagacaagactgttcgactctgggacttaacg
acgtacacgaaaggcaacaaggcattgaagccaagtcgtacatacacccatcattcatcg
attgttaacgatgttcagtatcacccactccattcttctctcattggcacagtgtccgac
gatatcacccttcaaatccttgacatccgtgaagcagaaacaacccgtgcggcagcttct
gcggaaggccaacatcgtgatgcaatcaacgcaattgcgttcaatcctgctgcagaaacc
gttctcgcgacaggctcagccgataaatccattggcctctgggatctgcgtaatctcaag
actaaattgcacacactcgagtgccataccgactccgtaacttccttgtcttggcaccca
tttgaggaatccgtcttggctagtgcaagctatgatcgtaaaattatgttctgggatctt
agccggagcggcgaggagcaaacccctgatgatgcacaggatggaccccctgagctcctc
ttcatgcacggtggccacaccaaccgtatctctgatttcagttggaaccttaacgaccca
tgggttctgtgttctgccgctgaagacaatctgctacaggtgtggaaggttgctgatgcc
attgttggtaaggacttggaggatgtgccaaccgaggaattagaggcctaa
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