Aspergillus oryzae: AO090103000067
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Entry
AO090103000067 CDS
T01018
Name
(RefSeq) unnamed protein product; mRNA cleavage and polyadenylation factor II complex, subunit PTA1
KO
K06100
symplekin
Organism
aor
Aspergillus oryzae
Pathway
aor03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aor00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
AO090103000067
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aor03021
]
AO090103000067
03019 Messenger RNA biogenesis [BR:
aor03019
]
AO090103000067
Transcription machinery [BR:
aor03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
AO090103000067
Messenger RNA biogenesis [BR:
aor03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
AO090103000067
U7-dependent histone pre-mRNA processing factors
AO090103000067
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SYMPK_PTA1_N
Motif
Other DBs
NCBI-GeneID:
5998802
NCBI-ProteinID:
XP_023093795
UniProt:
Q2TYX6
LinkDB
All DBs
Position
8:1082157..1084868
Genome browser
AA seq
793 aa
AA seq
DB search
MAQSTGSLVDQIAQLNAARTLVLGDAAFYPQIVNGVLPIIGARSRLELRRWGAEFLAETF
SSPALAPAQKEQLAAIALQTLRETLELPEKDTVTLKHIVEAAASLYPLKCAGNQFKPAHW
GIVGTDTLDNCSINHPEDSKVWENMTAIKDDILRRWDTSPFSVKVCCIKFVQRVVQVQTH
GLTDPRVRTGKKEMPAVPKGKTVDDSQRPEQNETSLAIVPRNHSILSLPYLEAEASGLLD
RLLSSIVPCPTNGPVIVSDPLLVNATLNSLAILIRTRQSIGNKIINAILSFVPARQARTP
VTPAVRVGVKSMERTARALMINIMKRNPSHPLASKMQQHIERLMQSRIETVDDSSKKRGL
PTEPTDGLDNSKRAKLDAESPPLIKVSPLPPGPVSYSQLYTLTEDAGLSSFDVKQLPVEL
LVKIVVPVLARVDQSALQQAVDGVRMRYQTLQKQQAAQPPPPATGEEEDDDYEPEYQPMD
VPEQAAEQEDALSAEPADLQPDLVSLGPFVLPQPPPLSENEAAEIGRSAVGRVFDMLASS
GVAPNTGKGKSQQHLGFSRLAGSTFDRDAWVTLLTRLATRAPAGLEVDHKKNDQDPSSKR
PTISDSIRETLYRYILEDFRGRVNVGIMWLNEEWYNDRIQMKFTASQRGEEDEESSVPLH
YDQWSLRLLDGFLPYLDSRDTKIFIRFLSEIPEVTIPITKRVASLAKDPERVNLCIQSLL
YLIMFRPPAREMCLNAVEDVYQTYEESRPAAGKVLARWRPQSTAVQQAQPEQQSTLVNRT
VESENNTPVANGA
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atggctcagtcgactggtagtcttgtcgaccagatcgcccagctcaacgctgcccgaacc
ctcgttctgggcgatgccgcattctacccacaaattgtgaatggtgttcttcctataatt
ggtgcgcgatcgcgattggaattacgacgatggggtgcagaattcttagcggagaccttc
tccagcccggcgctggctccagctcagaaggagcagctagctgccattgctttgcagaca
ctacgagagacgttggagttgccggaaaaggatactgtgactttgaaacatatagtggaa
gctgcggccagtttatatcccctgaagtgcgcaggaaaccaatttaagccggctcactgg
ggaattgtgggaactgacactcttgataattgcagcatcaaccaccctgaagactccaaa
gtttgggagaatatgaccgctattaaggacgatatactccggagatgggatacgtcccca
ttctcggtgaaagtatgctgtatcaagtttgtacagcgggtggttcaagtccagacccac
ggtctaacggaccctagagtacgtacaggaaagaaagaaatgcccgctgttcccaaagga
aagactgttgatgattcccagcggccggagcagaatgaaacgtccttggccattgttcct
agaaatcattccatcctctccctcccgtacttagaagccgaggcgtcgggcctactggat
agattgctgtcgtcaattgtgccatgtcccactaatggacccgtcatcgttagcgacccc
ctcctagtgaatgcgacgttgaacagtctagcgatcctgattcgaacccgacagtccatc
ggtaacaagattatcaacgcgatcctaagcttcgttcctgcaagacaagcacgcaccccg
gtgacgcctgcggttcgtgttggcgtcaagtcgatggagcgcacggctagggccctcatg
atcaatataatgaagagaaatcctagccatcccctagcaagcaaaatgcagcagcatatc
gagcgcttgatgcagtcgcgcatagaaaccgttgatgatagctcgaagaagcgtggccta
ccgaccgagccaacagatggtctggacaattccaagcgggcaaaactagatgctgaatcc
cctccactgatcaaggtgtcaccgctgcctccgggcccagtcagttactcacagctctat
acgttaactgaagacgctggcctctcctcttttgatgtgaagcaactaccggttgagctt
cttgtcaagattgtggttcctgttttagctcgtgtagaccaatctgccctgcagcaggcc
gttgatggtgtacgaatgcggtatcagacgctccagaagcagcaagctgcgcagcctcct
ccaccggcaacgggtgaagaagaagacgatgactatgagcccgaatatcaacccatggac
gtgcccgaacaggcggcagagcaggaagacgcactgtcggctgaaccggccgatcttcag
cccgacttggtgtcactcggtccttttgtgctcccacaacctcccccactatcagaaaat
gaggctgcagagatcggccgaagtgccgtgggaagagtgtttgacatgcttgcatcgagc
ggtgtggcgccaaatactggaaaaggaaagagccagcaacacctaggtttctcgaggctg
gctggcagcacctttgatcgggacgcctgggtaacactactcacccgactcgcgacgcgg
gcgcctgctgggttagaggtagaccacaagaagaacgatcaagacccgtcgtcgaagaga
ccgacgatatccgattctatacgcgaaacattgtatcgatatatactcgaagatttcaga
ggccgagtaaatgttggaatcatgtggttgaacgaggaatggtacaatgaccgaattcaa
atgaaatttaccgcgtcccaacgaggtgaggaagatgaggaatcgtcggtgccattgcac
tacgaccagtggtcactgcggcttctggacggatttttgccgtatctggattctcgggac
accaagatctttatccggttcctcagcgagattccagaggtaaccattcccatcacaaaa
cgggtagccagtctcgcaaaagatcctgagagagtgaatctctgcatccaatcgttgctg
tatctgattatgttccggcccccggcgcgggaaatgtgtctcaatgccgtagaggatgtt
tatcagacatacgaggaatcacgacccgccgctggtaaagtcctagccagatggcgtccg
cagagcacagctgtacagcaagcacaacccgaacaacaatctaccttggtgaaccgcaca
gttgaatcagagaacaacactcccgtcgcaaacggtgcttag
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