Aspergillus oryzae: AO090120000149
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Entry
AO090120000149 CDS
T01018
Name
(RefSeq) unnamed protein product; ATP-dependent RNA helicase
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
aor
Aspergillus oryzae
Pathway
aor03013
Nucleocytoplasmic transport
aor03015
mRNA surveillance pathway
aor03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aor00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
AO090120000149
09122 Translation
03013 Nucleocytoplasmic transport
AO090120000149
03015 mRNA surveillance pathway
AO090120000149
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aor03019
]
AO090120000149
03041 Spliceosome [BR:
aor03041
]
AO090120000149
Enzymes [BR:
aor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AO090120000149
Messenger RNA biogenesis [BR:
aor03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
AO090120000149
Spliceosome [BR:
aor03041
]
Complex C
Other components
EJC/TREX
AO090120000149
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
AO090120000149
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
CMS1
Ned1_M
Motif
Other DBs
NCBI-GeneID:
5996160
NCBI-ProteinID:
XP_001823901
UniProt:
Q2U6P7
LinkDB
All DBs
Position
5:complement(<3050094..>3052161)
Genome browser
AA seq
441 aa
AA seq
DB search
MSHEEDLIDYSDEELQTTDAAATTAAPAANGDAAKKGDLTVSGGRPDKKGSYVGIHSTGF
RDFLLKGELLRAITDCGFEHPSEVQQVCIPTAILNVDVLCQAKSGLGKTAVFVLTTLHQL
EPVPGECSVLVMCHTRELAYQIKNEYARFSKYLPDVKTAVFYGGTPIQKDVEVLSNKESY
PNIVVGTPGRLNALVRDKKLSLRNVKAFVLDECDKMLDQIDMRRDVQEIFRATPADKQVM
MFSATLSQEIRPVCKKFMRNPLEVYVDDDTKLTLHGLQQYYIKLSEAEKNRKLNELLDSL
EFNQVIIFVKSTLRANELDKLLRECNFPSIAVHSGVSQEERIKRYKEFKEFNKRICVATD
VFGRGIDIERINLAINYDLPADADSYLHRVGRAGRFGTKGLSISFVSNEEDEKVLKDIEK
RFEVALPEYPEGGVDSSTYMA
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgtctcacgaggaggatctcattgactactccgatgaggagcttcagaccactgatgcc
gcagctaccactgctgctcccgccgcaaatggcgacgccgccaaaaagggcgacctaacg
gtttctggtggccgtcccgacaagaagggaagctatgtcggtattcactcgaccggtttc
cgcgactttttactgaagggagaactcttacgtgccatcaccgattgcggtttcgaacat
ccatcggaggtccagcaagtttgcattccgaccgctattctcaatgtcgatgttctttgc
caggcaaagtctggtctcggaaagaccgccgtcttcgtcttgaccacccttcaccagctg
gagcctgtccccggagagtgctctgtcttggtcatgtgccacacccgtgagttggcttac
cagattaagaacgaatatgctcgtttcagcaaataccttcccgacgtgaagactgccgtc
ttctacggaggtacgcccatccagaaggacgtcgaagtgctgtccaacaaagaatcatac
cccaacattgtcgtcggtactcccggtcgactgaacgcccttgttcgcgacaagaagctt
tccctgcgtaatgtcaaggcattcgttcttgacgagtgtgacaagatgctcgaccagatc
gatatgcgccgcgatgttcaggagatcttccgtgctacacccgctgataagcaagttatg
atgttcagcgctactctctcccaagagatccggcctgtttgcaagaagttcatgaggaac
ccccttgaagtttacgtggacgacgacaccaagctcaccctccacggtttgcagcaatac
tacatcaagctcagcgaagcggaaaagaaccggaagctgaacgaactcctggatagcctt
gagttcaaccaggttattattttcgtcaagagcacactccgtgcaaatgagctggacaag
cttttgcgcgagtgtaacttccccagtatcgcagtccactctggtgtgagccaggaggag
cgtatcaaacgctacaaagaattcaaggagttcaacaagcgtatctgtgttgctactgat
gtcttcggacgtggtatcgatatcgagcgtattaaccttgctattaactacgacttgcct
gcggatgctgactcgtacctgcaccgcgttggtcgtgccggtcgtttcggtaccaagggt
ctctcgatctcgttcgtcagcaacgaggaggacgagaaggtccttaaggatattgagaag
cgtttcgaagttgctcttcctgaataccccgagggtggtgttgactccagcacgtacatg
gcataa
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