Aspergillus oryzae: AO090120000261
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Entry
AO090120000261 CDS
T01018
Name
(RefSeq) unnamed protein product; RNA-binding protein RBM8/Tsunagi (RRM superfamily)
KO
K12876
RNA-binding protein 8A
Organism
aor
Aspergillus oryzae
Pathway
aor03013
Nucleocytoplasmic transport
aor03015
mRNA surveillance pathway
aor03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aor00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
AO090120000261
09122 Translation
03013 Nucleocytoplasmic transport
AO090120000261
03015 mRNA surveillance pathway
AO090120000261
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aor03019
]
AO090120000261
03041 Spliceosome [BR:
aor03041
]
AO090120000261
Messenger RNA biogenesis [BR:
aor03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
AO090120000261
Spliceosome [BR:
aor03041
]
Complex C
Other components
EJC/TREX
AO090120000261
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_3
Motif
Other DBs
NCBI-GeneID:
5996255
NCBI-ProteinID:
XP_001823996
UniProt:
Q2U6F2
LinkDB
All DBs
Position
5:complement(3368245..3368837)
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AA seq
160 aa
AA seq
DB search
MSGEMEVDPPVSHEQEEAPAQSGGGFEPRTQAGAVAVRSIEGWIVIATNIHEESSEEDVT
DLFAEYGEIKNFNLNLDRRTGYVKGYALIEYSTLPEATEAIKNLNGTKLLDQTIQVDYAF
VRPPPSNKGKAGGQRGGGRGGRGRSRSRERSRSPGADERD
NT seq
483 nt
NT seq
+upstream
nt +downstream
nt
atgtccggagaaatggaagtggacccgccagtttcgcatgagcaggaggaagccccagcg
caatctggcggcggctttgagccacgaacccaggccggggccgttgcagtgcgcagtatc
gaaggatggattgtgatcgccaccaacatccacgaagaatcctcagaggaagatgtgacc
gacctgtttgctgagtatggagagattaagaacttcaatttgaaccttgatcgtcggacg
ggttatgtgaagggatacgccttgatcgaatattccactctgcccgaagctacagaagct
atcaagaacttgaacggaaccaagttacttgatcagacaattcaagttgactatgcattt
gtccggccgcctccctcgaacaaaggcaaggctggtgggcaaagaggcggtggtcgtggt
ggacgaggccgcagcaggagccgcgagaggagtcgcagccccggcgctgatgagagggat
taa
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