Aspergillus oryzae: AO090120000312
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Entry
AO090120000312 CDS
T01018
Name
(RefSeq) unnamed protein product; mRNA splicing factor
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
aor
Aspergillus oryzae
Pathway
aor03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aor00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
AO090120000312
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aor03019
]
AO090120000312
03041 Spliceosome [BR:
aor03041
]
AO090120000312
Messenger RNA biogenesis [BR:
aor03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
AO090120000312
Spliceosome [BR:
aor03041
]
Complex B
Other components
Prp19-related factors
AO090120000312
Complex C
AO090120000312
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_PRP39_C
TPR_14
Suf
TPR_8
TPR_15
RPN7
ARM_TT21
Motif
Other DBs
NCBI-GeneID:
5996296
NCBI-ProteinID:
XP_001824037
UniProt:
Q2U6B1
LinkDB
All DBs
Position
5:complement(3501754..3504479)
Genome browser
AA seq
833 aa
AA seq
DB search
MDRTSASGPDLYLIADQDTVYEQDLLRDTGSIKPWLAYIEYKQQHGTLYEQAFVMERACK
QLPRSYKLWKMYLEFRTKHLKGRNPTIYRPEYQKVNALFERALILLNKMPRIWELYLSFL
LHQPLVTQTRRTFDRALRALPITQHNRIWKLYKAFARSASGQTAVKIWARYMQIHPENAE
EYIELLVEMGQYTEAVKRYMEILDNPRFQSKEGKSHFQLWTEMVDLLVSKAKQIETGPHV
GIDVDAILRSGIDRFADQRGKLWAGLATYWITKGSFEKARDTFEEGITTVMTVRDFTLIF
DSYVEFEESIIGNLMEAAAVRADKGQSDEEADFDLDLRMLRFEQLMDRRPFLVNDVLLRQ
NPNNVIEWEKRVALWGDNKQEIVNTYTAAIAAISPKKAHGKFSELWVNYAKFYESGGDLD
TARVIFEKAVKVPFKSVAELAETWCEWAEMELRSENFDKAVEVMAKATQAPKKSTVDYFD
ENLSPQQRVHKSWKLWSFYVDLVESVASLEETKKVYERIFELRIATPQTVVNYANLLEEH
KYFEDSFKVYERGLDLFSYPVAFELWNLYLTKAVDRKIGIERLRDLFEQALDGCPPKFAK
PLYLMYGNLEEERGLARHAMRIYERATRAVSDEDRFEMFEFYITKSASNFGLPSTRPIYE
RAIAALPDQEAKEMCLKFAEMERRLGEIDRARAIYGHASQFCDPRTNAPFWQKWEAFEVQ
HGNEDTFKEMLRIKRSVQAQYNTDVNFIASQAIARSQQRAQDGDEKGAEEGDVDGSTADA
MAALERQARAPVGFVAASTGPEGGNRPPPPGQEQPAAPANPDAIDLDEDMDAE
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
atggatcgcacgtcggcctcagggccggacctctacttgatagccgaccaggatactgta
tatgagcaggatctccttcgggacaccggcagtatcaaaccatggcttgcttatatcgaa
tataagcagcagcatgggacgctctacgagcaggcttttgttatggagcgtgcttgcaag
cagctcccaagatcttacaaactgtggaagatgtacttggaattccgcacgaagcatctt
aaaggtcgcaaccccactatataccgacccgaataccagaaggtcaacgcacttttcgag
cgggcccttattctcctcaacaaaatgccacggatttgggaattgtacctctcattccta
cttcaccaacccctcgtgacgcaaactcgacgtacgttcgaccgcgcactacgagctcta
ccgatcactcaacataacaggatatggaagctttacaaggctttcgcgcgttccgcttct
ggccagacagccgtgaaaatctgggctcggtacatgcagatccacccggagaacgcggag
gaatacattgagcttcttgtggagatgggacagtatacggaagctgtaaagcggtatatg
gagatactcgacaacccaagattccagtctaaggaggggaagagccacttccagctgtgg
actgaaatggtggacttgctcgtgtcgaaggcgaagcaaatcgaaactggcccgcatgtc
ggcattgatgtggacgctattctccgcagtgggatcgaccggttcgctgaccagagaggg
aaattgtgggctggattagcaacatattggatcacgaagggtagtttcgaaaaggctcga
gataccttcgaagagggcatcacgacggtcatgacggttcgcgactttacacttattttc
gactcctatgtcgaatttgaagagtcaattattggtaatttgatggaagcagcagctgtt
cgtgctgataaaggccaatccgatgaagaggcagatttcgatctcgatctccgaatgctg
aggttcgaacagctcatggaccgccggccattcctggtcaatgatgtattgctacgacag
aaccctaacaatgtcatcgagtgggagaagagggttgctttgtggggtgacaacaaacaa
gaaatcgtcaacacttacacggcagccatcgcggctataagccctaagaaggctcatggc
aagttctccgagctctgggtcaactacgctaaattctacgagagcggaggagatctggat
acagctagggtaatctttgagaaggctgtgaaggtccccttcaaatcggttgctgagctc
gccgagacgtggtgtgaatgggctgaaatggaactccgcagcgagaacttcgataaagcc
gttgaggttatggcgaaagcaacgcaagcgccgaagaaatcaacagtcgactacttcgat
gagaacctttcgcctcagcaacgagttcacaagagctggaaattgtggagtttctacgtt
gatttggttgaaagcgtcgcgtcgttggaagagacaaagaaggtttacgagaggattttc
gagctacgcatcgccacgccccaaactgtggtcaactatgccaatcttttggaggagcac
aagtactttgaggattcattcaaggtttacgagcgaggtttagatctcttcagctacccg
gttgcattcgagctttggaacctctacttgactaaagctgttgatcggaagattggtatt
gaaagattacgagacctcttcgaacaggccctggatggatgtcctcccaagtttgccaag
ccgctctatctaatgtatggcaatcttgaagaggaacgtggattagcccgccacgccatg
cgtatctacgagcgtgctactcgtgcggtgtccgacgaggacagattcgagatgtttgag
ttctacattaccaaatccgcgtcgaactttggattaccttctacaaggccaatctacgaa
cgtgctattgcggcattgcctgatcaagaagccaaggagatgtgcctcaaatttgcagaa
atggaacgacgacttggcgaaatcgaccgagcccgcgcaatctatggccacgcttctcag
ttctgcgatccccggacgaacgctcctttctggcagaaatgggaggcattcgaagttcaa
catggcaacgaagataccttcaaggagatgcttcgtatcaagagaagtgttcaagcacag
tacaacaccgacgtcaacttcatcgcctcccaggctattgctcgcagccaacagcgggct
caagacggcgacgaaaagggcgccgaggaaggagatgtggatggttcgacagcagacgct
atggcagccctggaacgacaagcgcgtgctcctgtgggctttgtcgctgccagcacaggc
cccgagggtggaaaccgacctccaccacctggccaagagcagccagctgctcctgcgaac
cctgacgctattgacctggacgaagatatggatgccgagtaa
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