Aspergillus oryzae: AO090120000397
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Entry
AO090120000397 CDS
T01018
Name
(RefSeq) unnamed protein product; small nuclear ribonucleoprotein (snRNP) Sm core protein
KO
K11096
small nuclear ribonucleoprotein D2
Organism
aor
Aspergillus oryzae
Pathway
aor03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aor00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
AO090120000397
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aor03041
]
AO090120000397
03032 DNA replication proteins [BR:
aor03032
]
AO090120000397
Spliceosome [BR:
aor03041
]
Complex A
U1 snRNP components
Sm proteins
AO090120000397
U2 snRNP components
AO090120000397
Complex B
U1 snRNP components
AO090120000397
U4/U6.U5 tri-snRNP components
AO090120000397
Complex C
U2 snRNP components
AO090120000397
DNA replication proteins [BR:
aor03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
AO090120000397
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
INTS4_8HBD
Motif
Other DBs
NCBI-GeneID:
5996371
NCBI-ProteinID:
XP_001824112
UniProt:
Q2U636
LinkDB
All DBs
Position
5:complement(3743353..3743989)
Genome browser
AA seq
115 aa
AA seq
DB search
MSTDPKIQDLLNKPKSELTEYEVSLVEEHELTAGPLSLLQTATRTHTQVLIACRSNRRLL
ARVKAFDRHCNMVLENVKEMWTEKPKGGKGKGVNKDRFISKMFLRGDSVILVLLS
NT seq
348 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaccgacccaaagatccaggacctgcttaacaagcccaagagtgagcttactgaa
tacgaggtctccctcgtcgaggaacatgagctcacagctggccccctctccctcctccaa
accgccactcgcacacacacccaggtcctgatcgcctgccgtagcaaccgtcgcctgctc
gctcgcgtgaaggcgttcgatcgccactgcaacatggtgttggagaacgtcaaggaaatg
tggacagagaagcccaagggcggtaaaggcaagggtgtcaacaaggatcgcttcatcagc
aagatgttcctgcgtggtgactccgtcatcctcgttctgctcagttga
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