Aspergillus oryzae: AO090120000503
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Entry
AO090120000503 CDS
T01018
Name
(RefSeq) unnamed protein product; exosomal 3'-5' exoribonuclease complex, subunit ski4 (Csl4)
KO
K07573
exosome complex component CSL4
Organism
aor
Aspergillus oryzae
Pathway
aor03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aor00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AO090120000503
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aor03019
]
AO090120000503
Messenger RNA biogenesis [BR:
aor03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
AO090120000503
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
AO090120000503
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
Motif
Other DBs
NCBI-GeneID:
5996458
NCBI-ProteinID:
XP_001824199
UniProt:
Q2U5U9
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Position
5:complement(4026917..4027690)
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AA seq
257 aa
AA seq
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MASTLPALAIPGQRLGPVTSYSAGPGTHVQQSNVYASIAGPVVVEPAQPGSKGKATLSVS
RSIRAPGTGNASKPVTTAPGAKPAATSATPKPKVKYNTLPAVDSVVLARVTRVQKRQATV
SILVVLDESGSTQGVNPSQTTSDNDNIEAILSSAANPENHSSSDELRFQALIRKEDVRAV
EKDRVVMDEMFRVGDIVRGTVISLGDQSFYYLTTARNDLGVVMARSEAGNMMFPVSWKEM
RDSVTGQAEMRKVARPF
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atggcaagcacactcccagccctggccattccaggccaacgtctgggcccagtgacctcc
tactccgccggtccaggcacacacgtacaacaatccaatgtctacgcctccatcgccggc
ccagtcgtcgtcgaaccagcgcaacccggctccaaaggcaaagctaccctaagcgtttct
cgctcgatcagggctcctggaacaggcaatgcctccaaacccgtaaccacagcacccggc
gccaaaccagcggcaacttccgctacccccaagcccaaagtgaaatataacaccctcccc
gcagtcgattcggtggtgctggcgcgcgtgacgagggtccagaaacgtcaggctacggtg
tctatcctcgttgtgttggatgaatcgggcagcacccagggtgtcaacccctcacagaca
acgtccgataacgacaacatcgaggcgattctctcctccgccgccaatcccgagaaccat
agcagttccgacgagctccgcttccaggctcttattcggaaggaagatgtgcgtgctgtt
gagaaagaccgcgtcgttatggacgagatgttccgcgttggtgatattgtccgtggaacc
gttatctccctcggtgatcagagtttctactatttgactactgcgcgcaacgatctgggc
gttgttatggctcgtagcgaggcaggcaatatgatgttccccgttagttggaaggaaatg
agggattctgtcaccggtcaggcggagatgaggaaggtagcgagaccgttttga
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