Aspergillus oryzae: AO090206000056
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Entry
AO090206000056 CDS
T01018
Name
(RefSeq) unnamed protein product; RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH, subunit TFB2
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
aor
Aspergillus oryzae
Pathway
aor03022
Basal transcription factors
aor03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
aor00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
AO090206000056
09124 Replication and repair
03420 Nucleotide excision repair
AO090206000056
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aor03021
]
AO090206000056
03400 DNA repair and recombination proteins [BR:
aor03400
]
AO090206000056
Transcription machinery [BR:
aor03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
AO090206000056
DNA repair and recombination proteins [BR:
aor03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
AO090206000056
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
5998676
NCBI-ProteinID:
XP_001826560
UniProt:
Q2PIU7
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All DBs
Position
7:complement(2720795..2722364)
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AA seq
480 aa
AA seq
DB search
MAMAVAPSRPFDYLESLPGTTFYKLYQQPSTALAIFRRMLPDLAKCFVMALLYLKDPLPA
TDLEAWVKAESLKERDNALSILGRLHILSNTVITDNVRAYKVTDPFASSLRQALTGAEKT
QSFGVLWHISDGAAVSIAELDEYARRQWEGVLGYMVGTSGLGIQRDANLSKGVKQLLQAG
HLVEIRDRRVEITQDGFAFVLQDVSTQVWHILMLYVESADAIGMSSVEVLSFVFLLSSLE
LGKAYDKKHLTSNQLRTLTDLADFGIVYQDSPDASHFYPTRLATTLTSDSSALSNPISGS
LSGPSGTGSNKAGSGFIIVETNYRLYAYTSSPLQISLIALFTTLKYRFPNLITGKITRQS
VRRAIEMGITADQIISYLATHAHPQMRKHNVSRSTSNQAGIPPSVLPPTVTDQIRLWQLE
RDRVKATPGFLFKDFVSLAEYEAPCRYAEEIGVLVWKSDRKRMFFVTRHEQVAAFLRSRK
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atggccatggctgtcgctccctcccgtccatttgattatctggaaagcctgcctggaacg
actttctacaagctctaccagcagccatctaccgccctcgccatcttcaggcgcatgtta
cctgacctagcaaaatgtttcgtcatggcgcttctatatcttaaagaccctctcccagca
acagatctggaggcctgggtcaaggcagaaagcttgaaggagcgagataatgcattgtca
atactgggtcgactccatattctatccaacaccgtgatcacagataacgttcgtgcgtac
aaagtcaccgatccgtttgcctcatcgctccgtcaggctctgacgggcgctgaaaagacg
cagtcctttggtgtactctggcatatatcagatggagcagccgtttccatagctgaactg
gacgagtacgcccggcgtcagtgggagggggtattgggatacatggtcggaaccagcgga
cttggtattcagcgcgatgcaaacctgagcaaaggcgtgaagcaacttttgcaggctggg
catcttgtcgaaatccgggatcgtcgcgtggagatcacacaagatggattcgcttttgtt
ctacaggatgtcagcacccaagtttggcacatccttatgctctatgttgaaagcgcggac
gcaatcggaatgagcagtgtggaggtcctctcgttcgttttcttgctgagcagcttggag
cttggaaaagcatacgataagaagcacctgacatcaaaccaactccgtactctgacggac
ctggcggattttggcattgtctaccaagattccccggatgccagtcatttctaccccact
cgcctcgccactactcttacctccgactccagcgctttgagcaaccccatttcaggttcc
ctctccggtccctctggcacaggctcaaacaaggcgggatctggattcatcatcgtcgaa
acaaactaccgactgtatgcatatacctcttcgccgttgcagatctctcttattgcactt
ttcactacacttaaataccgctttcccaacctgatcaccggcaaaattacccgccagtcg
gtgcgccgcgccatagagatgggtatcactgccgaccaaattatctcgtatctggctacc
cacgctcaccctcagatgcgcaaacataatgtctcccgatctacgtctaatcaggccgga
ataccgccatccgttctgcccccgactgtcactgatcagattcggctttggcaactggaa
cgagatcgcgtcaaagcaacccctggctttttgttcaaggacttcgttagcttggcagaa
tatgaggctccatgtcggtacgctgaagagatcggggttctcgtctggaaatcagatcga
aagcggatgttctttgtaacgaggcatgagcaagttgcagctttcttgaggagtaggaaa
tag
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